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H1-16-all-fractions_k255_4332248_19

Organism: H1-16-all-fractions_metab_conc_1

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(18910..19329)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZI2_ACIFD similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 133.0
  • Bit_score: 121
  • Evalue 5.20e-25
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 133.0
  • Bit_score: 121
  • Evalue 1.50e-25
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 135.0
  • Bit_score: 130
  • Evalue 1.20e-27

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GCCGCCAAGCTCGAGCGCCAGCCGACCGACGAGGAGATCTCGAAGGAGTCCGGCGTCCCGATGGACCAGATCCAGGAGATCCGCGAAGCCGGCCGCGCAGTCACGTCGCTCGACAAGCCCCTCGGCGAGGAGGGCGAGGCCGCGTTCGGCGACCTGCTCGCGTCCGACGAGATGACGCCCGAGGAGGAGGTCCACCTGTCGCTGTCGGAGCAGACGGTCCGGCGCACGCTCGAGGAGCTGCCGGAGACCGAGCGCGAGGTCCTCAAGCTGCGTTACGGCATCAACGGCGACGAGCCGACGCCGCTCCGCGAGACCGGCAGGCGCCTCGGGATGTCGCCCGAGCGCGTCCGCCAGATCGAGTCGAAGGCGCTGGCGAAGCTGGCCATGCGCAGAGAGCTCGACGCTCTTCGCGTGGCTTAG
PROTEIN sequence
Length: 140
AAKLERQPTDEEISKESGVPMDQIQEIREAGRAVTSLDKPLGEEGEAAFGDLLASDEMTPEEEVHLSLSEQTVRRTLEELPETEREVLKLRYGINGDEPTPLRETGRRLGMSPERVRQIESKALAKLAMRRELDALRVA*