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H1-16-all-fractions_k255_1136617_9

Organism: H1-16-all-fractions_metab_conc_1

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(11627..12742)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:AKA59508.1}; TaxID=1630017 species="Bacteria; environmental samples.;" source="uncultured bacterium NM_1663.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 232.0
  • Bit_score: 133
  • Evalue 3.80e-28
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629416 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 187.0
  • Bit_score: 108
  • Evalue 1.20e-20
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 185.0
  • Bit_score: 102
  • Evalue 1.50e-19

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Taxonomy

uncultured bacterium NM_1663 → Bacteria

Sequences

DNA sequence
Length: 1116
ATGACTGACCGTCAAACGCCCGATGTGGCAAACGGCCGCGCGAGGCGTACGATCGCGACGGCTGTGCCGGGGACCGCGCGGGGAACACGTGGGACGCACGTCACGACGTACTGCGTCGTGCCGCGTCCGCTGGCCGACGAGCTCCACGATTCACTGCGCGAGCACTTCCGCGGGAATGCCGACGTCCGTGTCGTCGTCGAATTTCGCAGCGGGGAGCGGCGCAAGAGCGAGGACCGGCGCGCCGTCGCGGCGGCCGCAGCGGCGGCGACCGAGGAAGAGCGCCGCCGGATCCGCAGTGAGACCGGGCGGCGGGTGGCCGACCGCCGGGCCGTCACGGTCCCGGTCGAGGCTCCCACCCTGCCGCGCCGTTTCCGCCGGCACGCGGACGACATCCGCTTCTACGAGCGCATCGAGCCGAACAGCCAGCGCGCGCTCGACGCCGACAACGCGCGCCTGGTCATGCGCTTCCAGCAGGGCGACAAGAGCGCCTTCACCGACCTCTACATGCGCAACTTCGACAGCGTCTACACGTACTTGAAGGTCGCGCTCAAGGACCACCACGAGGCCGAGGACGCGGCGCAGCAGGTCTTCATCAACACGCTCGAGGCGCTGCCGCGGTTCGAGCTGCGGCGCGGCAAGCCGTTCCGCGCGTGGCTGTTCCGCATCACGCGCAACCAGGCGCTCTCGCATCTGCGCAAGCACCGCGTCATCGAGGTCGAGGATCCGGCCGAGCTCACCCGGCGCCGCCGCGGCGACACCGAGGTCGAGGCCGAGAAGCGCGCGCTGGACTGGCTGAGCGACAGCGACCTGCTGATCCTGATCGAGCGGCTGCCGGTCGCGCAGCGCCAGGCGCTCACGCTGCGCTACATGCTCGGTCTCACGACCGACGAGATGGCGACCGTGCTCGGCCGCACGACGATGGCCGTCCGCAAGCTCGAGCACCGCGCGCTGCGCTTCCTCGAGCAGAGGCTCGTGGCGACGGGCCGCAAGCCGCTCGACCCGGAGCGGATGGGCATGGTCGTCGACATGAACCGCGGACCGGTGACCGAGGCACGCAAGCGCTCGCTCGGAACGGCGCGCGCCGGCGCGGGCCGCCCGCACAGCGGAGTGCGCTGA
PROTEIN sequence
Length: 372
MTDRQTPDVANGRARRTIATAVPGTARGTRGTHVTTYCVVPRPLADELHDSLREHFRGNADVRVVVEFRSGERRKSEDRRAVAAAAAAATEEERRRIRSETGRRVADRRAVTVPVEAPTLPRRFRRHADDIRFYERIEPNSQRALDADNARLVMRFQQGDKSAFTDLYMRNFDSVYTYLKVALKDHHEAEDAAQQVFINTLEALPRFELRRGKPFRAWLFRITRNQALSHLRKHRVIEVEDPAELTRRRRGDTEVEAEKRALDWLSDSDLLILIERLPVAQRQALTLRYMLGLTTDEMATVLGRTTMAVRKLEHRALRFLEQRLVATGRKPLDPERMGMVVDMNRGPVTEARKRSLGTARAGAGRPHSGVR*