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H1-16-all-fractions_k255_5699977_5

Organism: H1-16-all-fractions_metab_conc_1

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3552..4277

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F264_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 234.0
  • Bit_score: 256
  • Evalue 2.40e-65
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 234.0
  • Bit_score: 256
  • Evalue 6.70e-66
Tax=RBG_13_Actinobacteria_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 241.0
  • Bit_score: 260
  • Evalue 1.80e-66

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Taxonomy

RBG_13_Actinobacteria_63_9_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 726
TTGCGCCGCTACCACCAGGACGGCGACATCAGCGCGCGCCAGGAGCTGATCGAGCGCCACATCGGCTTCGTGCGCCGGCTGGCGCAGCGCTACGCGCGCCGCGGCGAGCAGCTGGAGGACCTCACGCAGGTCGGATGCGTCGGCCTGATCAAGGCGATCGACCGCTACGACGGTGGCCATGGCGCGAGCCTCACCACCTATGCCGCGCCCAACGTCCTCGGCGAGATCAAGCGCCACTTCCGCGACCGCGGCTGGTCGGTTCGCGTCCCGCGCGAGATCCAGGAATTGAACGTCAAGCTGACGCGCGTCGTCGACGAGCTGACCGTGAGGCTGGGGCGGTCGCCGTCGGTGGACGAGCTGTCGGCGGCGACCAACACCACTGTCGAGCAGGTGCTCGAAGCGCTCGAATCGTCGGCGGCCTACTCGACGTTGTCGCTGTCCGAGTCGCCGGAGCGCGACGACGAGGGGCAGGGACCGATGGACACGCTCGGGGAGGAGGACGAGGAGTACGACCGCTCCGAAGATCGGCTGACGCTGGCGACCGGCATCCGGCGGCTGCACGCGCGCGAGCGGACGATCCTTCACCTGCGCTTCTTCGAGGGCCTGACCCAGTCCGAGATCGCCGACCGGGTCGGGATCTCGCAGATGCACGTATCGCGGTTGATCCGCGACTCGCTCGACCGCATCCGCGACGAGCTCGAGCGCGGCGAATTGCCTGACGGCTGA
PROTEIN sequence
Length: 242
LRRYHQDGDISARQELIERHIGFVRRLAQRYARRGEQLEDLTQVGCVGLIKAIDRYDGGHGASLTTYAAPNVLGEIKRHFRDRGWSVRVPREIQELNVKLTRVVDELTVRLGRSPSVDELSAATNTTVEQVLEALESSAAYSTLSLSESPERDDEGQGPMDTLGEEDEEYDRSEDRLTLATGIRRLHARERTILHLRFFEGLTQSEIADRVGISQMHVSRLIRDSLDRIRDELERGELPDG*