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H1-16-all-fractions_k255_2394006_1

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: 1..705

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Patulibacter medicamentivorans RepID=H0EAQ9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 31.7
  • Coverage: 249.0
  • Bit_score: 94
  • Evalue 1.50e-16
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.7
  • Coverage: 249.0
  • Bit_score: 94
  • Evalue 2.10e-16
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 222.0
  • Bit_score: 87
  • Evalue 5.20e-15

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ACCGGGGCGGCGATCGGCGGAGCCGCGGCTGCCGGCGGAGCGGCCGCCGGAGGCGGCGCAGCGGCGGCAGCGACCGGCGCGGCCGCCGCGATCGGCACCAAGGCCGCCGCGGGCCTCGCCACCGCAGCGATCATCGCCGGTGGGGCCGCCGAGATCCAGAACGTCGCCGATCACCATCCCGCTTCGAAGCCACAGGCCAAGGAGCGCAGCGCCCCGCAGAAGGCGCCGCCCGCGAACCCCTTGACCCAGGCAGCCCAGGCCCCGCCCACCACCGCCACACCGCCCACGACGCCACCCGCGGCCGCGACCACCCCGCCGCCCAACACCGTCACCGTCGAGCCTCAGCCAGCCGACCCGGCGGCCACCGACCCGACCACCGGCGCCACCGCGCCCACGGTCACCGGCAAGGCCACCACCGGACGGCACAAGCGCCACAAGGGCGCCCTCGCCAACAGCGAATCCCAGACCAAGACCGGCGCGCAGAGCGGGCCTGTCACCACCGGAGTGGAGCCGGCCACCTGCGACGCCGACGGCGACGGCGTCACCGATCCGGGCGCGCCCAGCAGCTGCACCTCCGGATCCGCGGTCACCACCGGCGTCGACCAGGGCAACACCGTCGCGCCCGTGCCCTACTCGGCCCCGGCGCCGAAGAAGAAGGCTGTCGCCAAGAAGAAGCTCAGGCGGCGGCAGGCACGATCCCGATGA
PROTEIN sequence
Length: 235
TGAAIGGAAAAGGAAAGGGAAAAATGAAAAIGTKAAAGLATAAIIAGGAAEIQNVADHHPASKPQAKERSAPQKAPPANPLTQAAQAPPTTATPPTTPPAAATTPPPNTVTVEPQPADPAATDPTTGATAPTVTGKATTGRHKRHKGALANSESQTKTGAQSGPVTTGVEPATCDADGDGVTDPGAPSSCTSGSAVTTGVDQGNTVAPVPYSAPAPKKKAVAKKKLRRRQARSR*