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H1-16-all-fractions_k255_2396045_3

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: 1814..2365

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZZ6_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 1.10e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 186.0
  • Bit_score: 157
  • Evalue 3.20e-36
Tax=RBG_16_Actinobacteria_70_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 172.0
  • Bit_score: 185
  • Evalue 4.20e-44

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Taxonomy

RBG_16_Actinobacteria_70_17_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGTCCACGGAGCGCTTCACCTCGCTCCTGGGGGCGGCCAGGGAGGGGAGCGAGGCCGCCTGGCAGGAGCTCTACGGCAGCCTCGCACCGGTGGTGCTCGGCTATCTGCGCGCCAACGCCGCCCCGGATCCCGAGGACGTGCTCAGCGAGGTCTTTTTGCAGGTGGCCCGCGACATGGTCCGCTTCGACGGTGACGAGCGCGGCTTTCGCTCCTGGGTCTTCACGATCGCGCACCATCGCCTGATCGATGCGCGGCGCCACTTGGCGAGGAGGCCAGTCGACCTCTCGGCGGAGCCACCCGAGCCGGTTGGGCATGCGGATGACGCTGCGGAGGAGGCGCTAGCGCGAATCGGCAACGAGGAGGTAGAGCGGATCCTCGGCGTGCTCTCCACCGACCAGCGGACGGTTCTGCTCCTGCGGGTGGTGGGGGATCTGAGCATCGAGGACGTGGCCAAGGCTGTGGGCAAGCGGCCGGGTGCGGTCAAGGCCCTGCAGCGGCGCGGACTTGCGGCTGTCAAGCGCGAGCTGGGCCGCGAGGGGGTAACCCTGTGA
PROTEIN sequence
Length: 184
MSTERFTSLLGAAREGSEAAWQELYGSLAPVVLGYLRANAAPDPEDVLSEVFLQVARDMVRFDGDERGFRSWVFTIAHHRLIDARRHLARRPVDLSAEPPEPVGHADDAAEEALARIGNEEVERILGVLSTDQRTVLLLRVVGDLSIEDVAKAVGKRPGAVKALQRRGLAAVKRELGREGVTL*