ggKbase home page

H1-16-all-fractions_k255_4958367_4

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: comp(2031..2360)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F274_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 97.0
  • Bit_score: 65
  • Evalue 3.50e-08
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 97.0
  • Bit_score: 65
  • Evalue 9.90e-09
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50249.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 97.0
  • Bit_score: 65
  • Evalue 4.90e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCAGACGGTCACCAAGCGCGAGGCCCTGGCTGTGCGCCGTCAGCGTGAGCGGCTCCTTGGATCAGCACGCCTGCCCGGTGGCGAGAGCGACGATGACCGCGATCCCCTCGACTCCATCGCCTCCGAGAGCCCCGGCCCGAACGATCAGGTCGCCAGCCGCGAGCGTGTGGTCCGAAGCCGCGAGGCTCTGCAGTCGCTGAAACCCCAGGAGGTCCGGGCGCTCACGCTCAAAGCGCAGGGGTACTCGTATGCCGAGATCGGCGAGATCACGGGCTGGACGTACACCAAGATGGGATCTGAGTCGCTGCATGCGTCCTCCCTCCGGTAG
PROTEIN sequence
Length: 110
MQTVTKREALAVRRQRERLLGSARLPGGESDDDRDPLDSIASESPGPNDQVASRERVVRSREALQSLKPQEVRALTLKAQGYSYAEIGEITGWTYTKMGSESLHASSLR*