ggKbase home page

H1-16-all-fractions_k255_5813989_2

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: 410..1759

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUE9_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 408.0
  • Bit_score: 248
  • Evalue 9.20e-63
ABC-type branched-chain amino acid transport systems periplasmic component similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 441.0
  • Bit_score: 251
  • Evalue 4.00e-64
ABC-type branched-chain amino acid transport systems periplasmic component {ECO:0000313|EMBL:AHY47095.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 441.0
  • Bit_score: 251
  • Evalue 2.00e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
GTGCCCGCCGTGGATCGGCGTCTTGCTCTCGTCCTTGCCGCCATTGCCGCATTCGTCGCGGGCTTGACGCTCGCCGCCTGCGGTGGAGGGGACAACGACAACAACAACGAGGTCAAGGGTGTCCAGGCCGTCGAGGGGGCCGACTGCGGCGACGTCCAGTACTCCGGCAGCGGCACTCCGTCGAAGCTGATCGTCTCGGACCTGCCGCTGCGAGGCGACTCGGCCGAGCGCTCCGACCAGCAGAACAAGGCGATCGTCCAGGAGATTGCGAAGCGCGGCTGGCAGGCGGGGCAGAACATCCAGGTCGCCTTCCAGGCCTGCGACGACACGATCGCCTCCACCGGCGACTGGGACGAGGCCACCTGCAAGTCGAACGCTCGCGCCTACGCCTCCAACCCCGACGTGATCGGCGTGATCGGCACCTACAACTCTGGCTGCGCCAAGCTCGAGATCCCGATCCTGAACAACGCGAGCGGCGGCGGCCTGGCGATGGTCTCGCCGGGCAACACGCTCGTCTGCCTCACCGAGACGGCGACCAGCTGCAAGTCCAACCAGCCGGACGTCTTCTACCCGACCGGCAAGCGCAACTACGCGCGGGTGGTCCCGAACGACGCGGTACAGAGCGCCGGTATGGCGAGCTTCGCCAAGGACCAGGGAGTGACGAAGCCGTTCTTCCTGATCGCGCAGGAGGACCAGACCAGCGCGGGCCAGGCGCGGACCCTCGAGGGCGCCGCCAAGTCACTCGGGATGCAGATCGCCGGCGTCGAGCACTTCGACCCCGAGGCGAAGAGCTACACCGACCTGATGCAGAAGGCCAAGGCGGCCGGGGCCGACGCCGTCTTCCTCGGCGCGATCCTCGAGGAGGGCGGCTCGCAGCTGATCAAGGACAAGGTGGCCGTGCTCGGGCCGAACGACGGCGCCGTCAAGCTACTGGCCCCCGACGGCTTCGCCCAGCAGTCGACGATCGACCAGGCCGGCGCGGACTCCGCGGGGATGTTCGCCAGCGCCCCGGGCAAGGAGCCGAGCTCCCTGACCGGCGCCGGGTCCGCGTTCGTCAAGGAGCTCAAGGCGCAGATCGGCGACAAGCCGGTCGAGACCTTCGCTCCCTACGCGGGTGAGGCCGCCGAGGTGATGCTCGACGCGATCCAGAAGGGCAAGGATCGCGCCGGCACGATCGCCGAGGTCTTCAAGACGAACATCAAGGACGGGATCATCGGCAGCATCGCGATCACGCCGAGCGGTGACCCGACCCCACCGCCGATCAGCATCTCCAAGGCCGCGGCCAGCTTCGAGCTCGAGCAGACGGTCGTCCCGCCACCCTCGCTGATCAACGCCGCACGCGGCGGCTGA
PROTEIN sequence
Length: 450
VPAVDRRLALVLAAIAAFVAGLTLAACGGGDNDNNNEVKGVQAVEGADCGDVQYSGSGTPSKLIVSDLPLRGDSAERSDQQNKAIVQEIAKRGWQAGQNIQVAFQACDDTIASTGDWDEATCKSNARAYASNPDVIGVIGTYNSGCAKLEIPILNNASGGGLAMVSPGNTLVCLTETATSCKSNQPDVFYPTGKRNYARVVPNDAVQSAGMASFAKDQGVTKPFFLIAQEDQTSAGQARTLEGAAKSLGMQIAGVEHFDPEAKSYTDLMQKAKAAGADAVFLGAILEEGGSQLIKDKVAVLGPNDGAVKLLAPDGFAQQSTIDQAGADSAGMFASAPGKEPSSLTGAGSAFVKELKAQIGDKPVETFAPYAGEAAEVMLDAIQKGKDRAGTIAEVFKTNIKDGIIGSIAITPSGDPTPPPISISKAAASFELEQTVVPPPSLINAARGG*