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H1-16-all-fractions_k255_443438_1

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: comp(62..931)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NTM2_STRVO similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 289.0
  • Bit_score: 326
  • Evalue 2.20e-86
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 289.0
  • Bit_score: 326
  • Evalue 6.30e-87
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEM83380.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 289.0
  • Bit_score: 326
  • Evalue 3.10e-86

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Taxonomy

Streptomyces violaceusniger → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 870
GTGAGCGACGACACACTGCTGGCCCAGGAGTTCGAGAGCCACCGGCCCCAGCTACGGGCGGTGGCCTACCGGATGCTCGGCTCACAGAGCGAGGCCGACGATGCGGTGCAGGAGACCTGGCTGCGGCTGAGCCGGAGCGACTCCGACTCGGTCGAGAACATGGGCGGCTGGCTGACCACCGTGGTCGGCCGGATCTGCCTCGACATGCTCAGGGAGCGCCGGGCGCGCGGCGAGGTGCCCGAGGAGGGCCCCTACGACCCGATCGTCACCATCGAGACCGAGGAGAACCCGGCGGAGGAGGCTGAGCTCGCTGACTCCGTCGGCCTCGCGATGCTGGTCGTGCTGGAGACGCTCACGCCCGCGGAGCGGATCGCGTTCGTCCTCCACGACATGTTCGGCGTCCCCTTCTCGGAGATCGGTGAGATCGCGGGCCGCTCACCGGATGCCGCCCGCCAGCTCGCCAGCCGTGCGCGCCGCCGGGTCCGGGGCGCGACACCTGAGGGCGATCACGACCTGGCCGAGCAGCGCCGGGTGATCGACGCCTTCCTGGCCGCCGCAAGGGCCGGCGACTTCGAGGCGCTGCTCGAGGTGCTCGACCCGGAGGTCACGTTCCGCGTCCATGCCGCCCCGGGCGACCCGCGCGCCGCTATCTCCGGCGTCGGCGCGGAGAACGTCGCCGAGCAGATCATCACGCAGGGTCGTCCGTTTGCCCAGATCGCGCGGCCCGCCATCGTCAACGGCGCGCCGGGACTGGTCACCGAGCGGGACGGCAAGAAGATCGGCGCCACGGCGTGCACGGTCAGCGGCGGCCGGATCACCTCGATGGACCTGGTGCTGGATCCCGACCGGCTGTCGCGTTCGACCGACTAG
PROTEIN sequence
Length: 290
VSDDTLLAQEFESHRPQLRAVAYRMLGSQSEADDAVQETWLRLSRSDSDSVENMGGWLTTVVGRICLDMLRERRARGEVPEEGPYDPIVTIETEENPAEEAELADSVGLAMLVVLETLTPAERIAFVLHDMFGVPFSEIGEIAGRSPDAARQLASRARRRVRGATPEGDHDLAEQRRVIDAFLAAARAGDFEALLEVLDPEVTFRVHAAPGDPRAAISGVGAENVAEQIITQGRPFAQIARPAIVNGAPGLVTERDGKKIGATACTVSGGRITSMDLVLDPDRLSRSTD*