ggKbase home page

H1-16-all-fractions_k255_1951871_5

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: comp(3686..4474)

Top 3 Functional Annotations

Value Algorithm Source
Hemolysin-type calcium-binding region n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6H8_ISOPI similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 240.0
  • Bit_score: 139
  • Evalue 3.50e-30
Putative calcium-binding protein {ECO:0000313|EMBL:ETW11363.1}; Flags: Fragment;; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 209.0
  • Bit_score: 141
  • Evalue 9.90e-31
hemolysin-type calcium-binding protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 240.0
  • Bit_score: 139
  • Evalue 9.90e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseivivax atlanticus → Roseivivax → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
GTGCTGACGCCCAGCCATCGCCCGCTGTTGCGTTTGGTCGTGCCCGCTTTCGCCGCCCTCCTGTTCGCGGCGGGCGTGCTCGCGGCCCCTGACGCTGCCCAGGCCAAGGTGCGCTCCTCGGTCAGCGGCCAGCTGCTGATGGTGTCGGGTGGCAGGGGCTCGGACGGCATCACGGTCACCTGTGGCGGAGACGGGCTGGTCAAGGTGAACGGCAAGAATCCGGGAACCGGGGCGATCGTCTGCAGCCGGATCTCGGAGGTCGATGTGACGACGGGCTCAGGGAACGACCGGGTGAACCTCGCCGGAGTGGGGTCGACCAACGGCTTCGGCCAGCGGGATCTTCCCGGCGGCTTCGGCCACGGGACGGGATGCGGCGTGCAGCTGGGCGACGGAAACGACCGCTACACGGGTGGAAAGTCCTGCTTCAACCTCGTCCTCGCGGGCCGCGGCAGCGATCGCGCCAGCGGCGGGGATCTGCGGGACGACCTGCAGGGTGACGCCGACGGCGACACCCTGTCGGGAGGAGGCGGCAGGGACGTGATCCTCGGCAACGGCGGCAACGACAAGCTCAACGGCGGTGCGGACGACGACCTGCTGAGCGGTAACGCCGGCGATGACGTGTTGACCGGAGGCGCCGGCAACGACCTGCTTGGGGGCGGCGCCGGGATGGATCGCCTGTTCGGCGGACCGGGCGACGATCAGCTGATCGGCGGGCCGGCCAAGGACCGCCTCGACGGCGGTCCGGGCAACAACACCCTGGTCCAGGACTTCCCGGCGAAGAAGCCCTAG
PROTEIN sequence
Length: 263
VLTPSHRPLLRLVVPAFAALLFAAGVLAAPDAAQAKVRSSVSGQLLMVSGGRGSDGITVTCGGDGLVKVNGKNPGTGAIVCSRISEVDVTTGSGNDRVNLAGVGSTNGFGQRDLPGGFGHGTGCGVQLGDGNDRYTGGKSCFNLVLAGRGSDRASGGDLRDDLQGDADGDTLSGGGGRDVILGNGGNDKLNGGADDDLLSGNAGDDVLTGGAGNDLLGGGAGMDRLFGGPGDDQLIGGPAKDRLDGGPGNNTLVQDFPAKKP*