ggKbase home page

H1-16-all-fractions_k255_8045_8

Organism: H1-16-all-fractions_metab_conc_94

megabin RP 50 / 55 MC: 12 BSCG 49 / 51 MC: 13 ASCG 12 / 38 MC: 1
Location: comp(5111..6058)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 3 domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XVY6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 313.0
  • Bit_score: 518
  • Evalue 2.60e-144
RNA polymerase sigma factor SigB similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 314.0
  • Bit_score: 521
  • Evalue 1.10e-145
RNA polymerase sigma factor SigB {ECO:0000313|EMBL:AIY19882.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 314.0
  • Bit_score: 521
  • Evalue 5.50e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGACTGTACGTCGCACGGAGCGCGAGATCGAGGGACGCGACAGCGTCGGGCTCTACCTCGACGAGATCGCCCGCACACCACTGCTCGACGCCATCACCGAGGTCGAGCTGTCCAAGACGATCGAGGCGGGGCTGTTCGCTGCCGCCCTGCTCGAGGAGGGTCGCGTCGGTCGCCGCAAGGGCGGCGCACCCGGATTCGCCACCCAGGCAGAGCTCGAGTGGATGGTCGAGGAGGGCGAGCGCGCGGTGCAGCGCTTCATCCAGGCCAACCTGCGCCTGGTGGTGTCCATCGCCCGCAAGTACGGCCGCAGCGCGATGCCGATGCTCGACCTGATCCAGGAGGGCAACACCGGCCTGATCCGCGCGGTCGAGAAGTTCGACTACGCCAAGGGCTACAAGTTCTCCACCTACGCGACCTGGTGGGTCCGCCAGGCCATCACCCGCGGCATCGCCCAGCAGGCCCGCGTGGTCCGACTCCCCGTGCACGTGGTCGAGGAGCTCAACCAGGTGTCGTCGGCGCGCCGCACCCTCGAGCGCCAGATCGGCCGCGAGCCGGAGCCTGCCGAGATCGCGGCCGAGCTCGGCATGGACGTCGACCGGGTCATCGACCTGATGGGCTGGGGGCGTGACCACGTCAGCCTGGACAGCCCCCTGGACGTCGACGGCGACACCTCGCTGGGCGACCTGATCGCGCAGGAGAGCTCGCCCGGCCCCGATCTGACGGTGCTCGACGTGGAGGCCCGCGACCGGCTCAACACCCTGGTCGAGCTGCTCGACGAGCGGTCCGCCGACATCATCCGCAGCCGCTACGGCCTGGTCGACGGACGCCAGCACAAGCTCGCCGACATCGGTGCCGCTCACGGCATCTCGGCCGAGCGAGTGCGTCAGCTCGAGCGAGAGGCGATCGCCAAGCTGCGGCGCCTTGCCGACCCGGACCTGGCCGCCTGA
PROTEIN sequence
Length: 316
VTVRRTEREIEGRDSVGLYLDEIARTPLLDAITEVELSKTIEAGLFAAALLEEGRVGRRKGGAPGFATQAELEWMVEEGERAVQRFIQANLRLVVSIARKYGRSAMPMLDLIQEGNTGLIRAVEKFDYAKGYKFSTYATWWVRQAITRGIAQQARVVRLPVHVVEELNQVSSARRTLERQIGREPEPAEIAAELGMDVDRVIDLMGWGRDHVSLDSPLDVDGDTSLGDLIAQESSPGPDLTVLDVEARDRLNTLVELLDERSADIIRSRYGLVDGRQHKLADIGAAHGISAERVRQLEREAIAKLRRLADPDLAA*