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H1-18-all-fractions_k255_1099762_15

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(11160..12062)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 299.0
  • Bit_score: 439
  • Evalue 2.00e-120
tRNA pseudouridine synthase B n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WDK2_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 299.0
  • Bit_score: 439
  • Evalue 1.40e-120
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 299.0
  • Bit_score: 439
  • Evalue 4.10e-121

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 903
GTGCCGCCAGCAGCCGCCAAACAGCGTGTCATCGTCCCGCCCGGTCTCGTCGTGGTCGACAAGCCGGATGGGATGACCTCCCATGACGTCGTCGCGCGGGTGCGGCGGATCATGGGCACGCGCAAGGTGGGCCACGCCGGCACTCTCGACCCGATGGCGACCGGCGTGCTGGTGCTCGGCATCGAGCGGGCCACGAAGCTGTTGGGGCACCTCGCGCTGGACACCAAGGCCTACCTCGCGACGATCCGCCTCGGCGCGGCCACCACCACCGACGACGCGCAGGGCGAGGTCCTGTCCACTGCGGACACCTCGGCGGTGACCGACGAGGCCGTGGCGGTCGGCGTCGCCAAGCTCACGGGGCGCATCCAGCAGGTGCCGAGCGCGGTCAGCGCCGTGAAGGTCGACGGCAAGCGGGCCTACGCGCGGGTCCGGGCCGGCGAGCAGGTCGAGCTGGCGGCGCGGCCCGTGGAGGTGTCCCGGTTCGACCTGCTGGCCGTCCGCCGCGAGGACGGCCTGGAGCTGGACGTCATGGTGGAGTGCAGCTCCGGCACCTACGTCCGCGCGCTCGCCAGAGATCTGGGCGCCGACCTGGGCGTCGGCGGGCACCTGGCCGCGCTGCGCCGCACCCGGGTGGGCCCGTTCGACCTGCGGGTGGTCACCACGCTGGAGAAGCTGGCCGAACAGCCCGCGCTGTCGCTGCCGCTGTCCGACGCGGTGGCCGCCGCGTTCCCGCGCCGGGACGTGCCGTACCGCCAGGCACAGGCCCTGCTGCAGGGCCAACGGCTACCGGCGGCCGGCATCGACGGCACCTATGGTGTGTTCGACCCGGACGGTCGGGCGATCGCGCTGGCGGTCGACGAGGACACCGCCACCCGCTCCGTGGTCGTCCTGACAACGACCTAG
PROTEIN sequence
Length: 301
VPPAAAKQRVIVPPGLVVVDKPDGMTSHDVVARVRRIMGTRKVGHAGTLDPMATGVLVLGIERATKLLGHLALDTKAYLATIRLGAATTTDDAQGEVLSTADTSAVTDEAVAVGVAKLTGRIQQVPSAVSAVKVDGKRAYARVRAGEQVELAARPVEVSRFDLLAVRREDGLELDVMVECSSGTYVRALARDLGADLGVGGHLAALRRTRVGPFDLRVVTTLEKLAEQPALSLPLSDAVAAAFPRRDVPYRQAQALLQGQRLPAAGIDGTYGVFDPDGRAIALAVDEDTATRSVVVLTTT*