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H1-18-all-fractions_k255_1582676_2

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1243..2367)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZJF6_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 374.0
  • Bit_score: 712
  • Evalue 1.90e-202
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 374.0
  • Bit_score: 712
  • Evalue 5.30e-203
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:AJK51966.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 374.0
  • Bit_score: 712
  • Evalue 2.60e-202

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Taxonomy

Amycolatopsis lurida → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
GTCGGCAAGGTTACCCCGAAGGGTGAGACCGAGCTGACCCCGGAGGAGCGGCTGCTCCGCGCGATCTTCGGCGAGAAGGCCCGCGAGGTGCGGGACACGTCGCTGAAGGTGCCGCACGGCGAGACCGGCAAGGTCATCGGCATCCGCGTGTTCTCCCGTGAGGACGAGGACGAGCTGCCCCCGGGCGTCAACGAGCTGGTCCGGGTGTACGTGGCGCAGAAGCGCAAGATCCAGGACGGCGACAAGCTCGCCGGCCGGCACGGCAACAAGGGCGTCATCGGCAAGGTGCTCCCGGCCGAGGACATGCCGTTCCTGCCGGACGGCACCCCGGTCGACGTCGTGCTGAACACCCACGGTGTGCCGCGGCGTATGAACATCGGCCAGGTGCTGGAGCTGCACCTCGGGTGGCTCGCCTCCCAGGGCTGGAAGGTCGAGGGCAACCCGGAGTGGGCGAAGGACCTGCCCGAGGAGCTCTACGACGTGGCCCCGGGCACGAACACCGCGACCCCGGTGTTCGACGGCGCCAAGGAGCACGAGATCACCGGCCTGCTCGGTTCGGCGCTGCCGAACCGGGACGGCGAGCGGATGGTGACCCAGGACGGCAAGGCGCGGCTGTTCGACGGCCGCTCCGGCGAGCCGTTCCCGCACCCGGTGGCGGTCGGGTACATGTACATCCTGAAGCTGCACCACCTGGTCGACGACAAGATCCACGCCCGTTCCACCGGCCCGTACTCGATGATCACGCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGCCAGCGCTTCGGTGAGATGGAGTGCTGGGCCATGCAGGCCTACGGCGCGGCGTACACGCTCCAGGAGCTGCTGACGATCAAGTCCGACGACGTGCTCGGTCGCGTCAAGGTCTACGAGGCGATCGTCAAGGGCGAGAACATCCCGGAGCCGGGCATCCCCGAGTCGTTCAAGGTGCTGCTCAAGGAGCTGCAGTCGCTGTGCCTCAACGTCGAGGTGCTGTCCAGCGACGGCGCCGCGATCGAGATGCGCGACGGGGACGACGAGGACCTCGAGCGCGCGGCCGCCAACCTGGGCATCAACCTGTCCCGCAATGAGTCGCCGTCCGTCGACGACGTCGTGAACTGA
PROTEIN sequence
Length: 375
VGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGIRVFSREDEDELPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKVLPAEDMPFLPDGTPVDVVLNTHGVPRRMNIGQVLELHLGWLASQGWKVEGNPEWAKDLPEELYDVAPGTNTATPVFDGAKEHEITGLLGSALPNRDGERMVTQDGKARLFDGRSGEPFPHPVAVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDVLGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLERAAANLGINLSRNESPSVDDVVN*