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H1-18-all-fractions_k255_1611675_19

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 16519..17028

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Actinoplanes globisporus RepID=UPI00037C375B similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 159.0
  • Bit_score: 176
  • Evalue 1.30e-41
RNA polymerase sigma factor sigW similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 163.0
  • Bit_score: 171
  • Evalue 2.00e-40
RNA polymerase sigma factor sigW {ECO:0000313|EMBL:AEV81553.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 163.0
  • Bit_score: 171
  • Evalue 9.90e-40

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Taxonomy

Actinoplanes sp. SE50/110 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGCAAGCAGCACTGGAACGGGAGTACGTCGACTACGTGCGTGCCGCCCTGCCCTGGCTCCGCCAGTCCGCGTTCCGGCTGTGCGGGGACGCGCACCGCGGTGACGACCTCGTGCAGCAGACGATCACCAAGCTCTACGTGAACTGGCGGCGGGTGCGGGGGGCCGACAACACCGATGCCTACACCCAGCGGATTCTCGTCCGGGTGTTCCTCGACGAGCGCAGGCTGCGCTGGACCGGGGTCTCGCTGTTCGCCGCCGCGCCGGAGGTCGCCGTCGAGCCGGACCAACGGGCCGAGGACCGCGCCACGCTCCGGGCGGCGTTGAAACACCTGCCGCGCAGGCTGAGCGAGGTGCTGGTGCTGCGGTTCCTGTTCGACATGTCGGTCGACGATGTAGCGCACGTGCTCGGCTGCAGCCCCGGCACGGTCAAGAGCCAGACCGCCAGGGCACTCACGTCGATGCGGCAGCGGCTCGGTACACCTTCTCCACTCACGGCCAAGGAGGCCTGA
PROTEIN sequence
Length: 170
MQAALEREYVDYVRAALPWLRQSAFRLCGDAHRGDDLVQQTITKLYVNWRRVRGADNTDAYTQRILVRVFLDERRLRWTGVSLFAAAPEVAVEPDQRAEDRATLRAALKHLPRRLSEVLVLRFLFDMSVDDVAHVLGCSPGTVKSQTARALTSMRQRLGTPSPLTAKEA*