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H1-18-all-fractions_k255_1822006_27

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(24156..24809)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Saccharomonospora halophila RepID=UPI0003742B6B similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 194.0
  • Bit_score: 339
  • Evalue 2.50e-90
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CEL18999.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 188.0
  • Bit_score: 346
  • Evalue 1.70e-92
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 185.0
  • Bit_score: 337
  • Evalue 2.70e-90

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGCGCGGTGCACGTTGAGCACGACAGTGGGTTTACCGACCCGGAAGAGGTGGCACAAGCCCTCATGCCAGCGACGACAGAAGCGACAGCCGCCGCCGCGCCTGTGACCCTCGACGACGAGCCCACCTGGACGCCGCCGTCGTGGGACGAGGTCGTGCGTGAGCACGCCGACCGCGTCTACCGTCTCGCCTACCGGCTGACGGGTAACGCGCACGACGCCGAGGACCTCACGCAGGAGACCTTCATCCGGGTGTTCCGGTCGCTGGCGAACTACAAGCCGGGCACCTTCGAGGGCTGGCTGCACCGCATCACCACCAACCTGTTCCTCGACATGGCACGTCGTCGCTCGCGGCTGCGCATGGAGGGGCTGCCGGAGGACACCGACCGCCTCGCCGGCGACGACCCGAGTCCGGAGCAGGTGTACGTGGCGAACCACCTCGACCCTGACCTGCAGGCCGCGCTGGACGAGCTACCCCCGGAGTTCCGGGCCGCGGTCGTGCTGTGTGACGTCGAAGGTCTCTCCTACGAGGAGATCGGCGCCACACTCGGCGTGAAGTTGGGTACTGTGCGCAGCAGGATCCACCGGGGGCGGCAGGCACTGCGCGCGTCGCTGGAGCGGCGCCGTGAACTGGTACGGGAGGGTAGGTCGTGA
PROTEIN sequence
Length: 218
MSAVHVEHDSGFTDPEEVAQALMPATTEATAAAAPVTLDDEPTWTPPSWDEVVREHADRVYRLAYRLTGNAHDAEDLTQETFIRVFRSLANYKPGTFEGWLHRITTNLFLDMARRRSRLRMEGLPEDTDRLAGDDPSPEQVYVANHLDPDLQAALDELPPEFRAAVVLCDVEGLSYEEIGATLGVKLGTVRSRIHRGRQALRASLERRRELVREGRS*