ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H1-18-all-fractions_k255_2005710_1

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1..516)

Top 3 Functional Annotations

Value Algorithm Source
Phosphoheptose isomerase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HZL7_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 244
  • Evalue 5.10e-62
Phosphoheptose isomerase {ECO:0000313|EMBL:EOD63709.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 168.0
  • Bit_score: 244
  • Evalue 7.10e-62
phosphoheptose isomerase similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 168.0
  • Bit_score: 240
  • Evalue 3.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGACCGGTCCCAGCGAGGACGTCCGGTCCCTGTACCCGTTCCTGTACTCGGGTGAGTCCGATGTGGCCGCCGTGCTCGCGCAGGTCCGACAGTCCACTGTGGACAAGACGCGGGAGATCACCGAGCTGCGCGAGCAGGTCCTGCGGCGCGACGGCGCGCGGCTCACCGCGTGTGCGGCGGTGATGGCCGAGCGGTTCGCGGCGGGTGGGCGGTTGCTCGCGTTCGGCAACGGCGGCAGCGCCACGGACGCGCAGGACCTCGCCGGGCTGTTCGTGAGCCCCGCCGACGACTCCCGGCCGCTGCCCGCGTTCAGCCTCACCGCCGACATCGCCGTGATCACCGCGCTGTCCAACGACGTCGGCTTCGACGTGGTGTTCGCCCGACAGCTCGGCGCGTTCGGCAGGAGCACCGACATCGCGGTCGGGTTGTCCACGAGCGGCAACTCGGCGAACCTGCTGCGTGCCTTCGACGAGGCGGCGCGGCGCGGCATGCTCACGGTCGGCATCGCCGGCTAC
PROTEIN sequence
Length: 172
VTGPSEDVRSLYPFLYSGESDVAAVLAQVRQSTVDKTREITELREQVLRRDGARLTACAAVMAERFAAGGRLLAFGNGGSATDAQDLAGLFVSPADDSRPLPAFSLTADIAVITALSNDVGFDVVFARQLGAFGRSTDIAVGLSTSGNSANLLRAFDEAARRGMLTVGIAGY