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H1-18-all-fractions_k255_455185_12

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 10929..11438

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RLI2_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 154.0
  • Bit_score: 171
  • Evalue 5.40e-40
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EWC58218.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 169.0
  • Bit_score: 226
  • Evalue 1.50e-56
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 154.0
  • Bit_score: 171
  • Evalue 1.50e-40

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCCACCATGGACAACGTCGTCGAGGCACACGGCCCCGCTCTACTCGCCTACGCGACCCGGCTGACCGGCGGGGACCGCCACGCCGCCGAGGACGTCGTGCAGGAGACCTGGTTGCGGGCCTGGCGGCACGTCGACCGGCTGACCGAGGACCGCGGGTCGGTGCGCGGGTGGCTCATGCGGGTGGCGCACAACATCGCGATCGACCAGCACCGCGGCCGCCGCGCCCGGCCGACCGAGGTCGAGCTGCCGGAGCTGGACGTGCCCGGCACGCCCGTGATCCCCGCGCCGAGCGACGAGGTGGAGACCCGGGTGGTCGTCGACGCCGTGCTGGACAACCTGTCCACGGAACACCGCACCACGCTGGTGGAGGTCTACTTCGCCGACCGCACCGCGAGATCGGCGGCGTCCGTGCTCGGCGTGCCCGTCGGCACCGTGAAGAGCCGGGTCCACCACGCGCTCAACACGCTGCGCTGCGTCCTGCCCCAGCGGCGGCTCGAAGCCGCCTGA
PROTEIN sequence
Length: 170
MATMDNVVEAHGPALLAYATRLTGGDRHAAEDVVQETWLRAWRHVDRLTEDRGSVRGWLMRVAHNIAIDQHRGRRARPTEVELPELDVPGTPVIPAPSDEVETRVVVDAVLDNLSTEHRTTLVEVYFADRTARSAASVLGVPVGTVKSRVHHALNTLRCVLPQRRLEAA*