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H1-18-all-fractions_k255_474439_57

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 59986..62598

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627982 similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 870.0
  • Bit_score: 811
  • Evalue 6.90e-232
ATP-dependent transcriptional regulator {ECO:0000313|EMBL:EIV92392.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 875.0
  • Bit_score: 767
  • Evalue 1.60e-218
Regulatory protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 870.0
  • Bit_score: 607
  • Evalue 5.60e-171

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Taxonomy

Frankia sp. QA3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2613
GTGGGGGACAGATGGCCCCTGGTCGGCCGGTTGTCGGAGTTACAGGCTATCGACGCGGTCGTTCGCCAGGCCGGCGGTGGGCGTGGTGTGGTGCTGGCAGGCGCCGCGGGGGTGGGGAAGACGCGGCTCGCCCGCGCGGCGTTGGCCAATGCACGGCGCGATGGGGTGCTCACCCGCTGGGTGGCGGGCTCGGAGTCGGCGCGCACGGTGCCGTTGGGGGCGTTCGCCTCGGTGTTGCCGTCCGTGGGGTCTGATCCGTTCCGCGCCCTGGGGCAGGCGAGCGGCGCGCTGCTCGCCGGTGCCGGTCAGCAGGGGGCGCTCGTGGTGGTGGACGACGCGCACCTGTTGGACGAGCTGTCGGCGACGCTGGTGCACCAGCTGGCGGTCGGCGCGGCGGCGACGGTCGTGCTGACCGTGCGTACGGGGGAGCCGGCGCCGGATGCGGTGACGGCGGTGTGGAAGGACGCCTACCTGGACCGGCTCGAGGTCGCGCCGCTGACCCGGGCCGAGACCGGGATGTTCCTGGAGGCCGTGTTGGGCGGGCCGGTCGAGATGGTCGCCGCGACGCGGATGTGGCGGCTGTCCCGAGGCAACGCGTTGTACCTGCGGGAACTCGTGGTGGGCGAGCGGGACGCCGGGCGGCTTACCGACCTCGGTGGCGTGTGGCGCTGGTCCGGTCAGCCCGCGCTGTCACCGAAGCTCGTGGAACTCGTGGAGTCCCGCATGGGCACCGTGCTCGACCCGGCTCGGGAAGTGGTTGACCTGCTCGCCTTTGCCGGCCCACTCGGCGTGGACGTCCTTGGCCGCCTGGTGGACAACTCCGCGCTGGAGTCGGCGGAGACGGCCGGCCTGGTGGAGGTGGAGGCCGACGGCCAGCGCTTGACGACGGGGCTCGCGCACCCGCTGTACGGGGAGGTTCGGCGGGCCGCGACCGGGGTGTTGCGGGCCCGCGGTCTGCGCGGCCGGATCGCCACGGCCCTGCTGGACACCGGCGCCCGCCGTGCCGACGACGAGCTGCGCTGTGCGGCGCTGATGCTCGACTCCGACCTCACCCTCGACCCGGATCTCCTCTCACGTGCGGCGGGCCGGTCGGCGCAGCTGCTGGACCTGCCGCTCGCGGTGCGGCTCGCACTGGCCGCGGTGGCGGCCGGCGCCGGGTTCGCCGCGCGGGCGATCGTCGCGCAGTCGCTGACCATGCAGGGGTGGGGTGCCGAGGCGGAGGCCGAGCTGCGGGTCCTCGCGGAGTTGGCTGATACCGATGTCGAGCGGGCGTGGGTGGCCGCGATGCGGGCCGGCAACATGTTCCTGACGCTGAACGACCCGGCTACCGGTGACCGGCTGCTGACCGAGGCGCTCACCGCGATCCCGAACGTCGGCGCCAGGGAGATCCTGTGGGCGCTGCGCTCGGTGTTCGACAGTCACCTGGCCCGACCCGCCGACGCACGGCGGGCCGCCACCGTCGTGCTCGACGCGCCGTGCCCACAGCCCATCTCGGAGTTCGCGGCCCGCTGGGGGTTGACCGGCGCGCTCGGCCTCACCGGCCACGCCGACGAGGTCGAGGCGGTGGCATCCCGCGCCTACCTGCTGGCGAACACCTTCGACACCGCGGTGTTGCGGTTCAACCTGGCCGAGTTCGAACTCCTGGCCTACCGGCTCGCCGGGTATCTCGCGCAGGCCGACGCGGTCGCGGCCCGTTGCCGCGACGAGGCCGCCGAGATGCCCGGTGTTCCGCTGCTGTTCGCCGCCGCGCTGACTGGGCACGCCGAGCTCGCCAGGGGCCACCTGCGGGACGCCGTGCGCTGGCTGCGGGAGGCCCTGGCCGGGTTCACCGTCGTCGATCCGGCCGGACGGGTGTTCGACTGCCTGCTCTGGCTGACCCAGGCGCTGGCGACGGCCGGTGACACCGACGCCGCGCGGCGGGCGTTGGCCGACATGGAGGCCAACCGGCATCACGGGTTCGTGTACCGGGAGCCCGAGGTGTTGCTGGCCAGGGCCACCGTGGCCGCGGCGCAGGGCGCGCTGAGCAAGGCCGTCGCCCTGGCCAGGGAGGCGGCCGGGACCGCGAGGGCGGCGGGACTCGCGGCCTACGAGGTGCAGGCGCTGCAGACCGCGGTGCGCTTCGGCGATCACGGCACGGCCGCGCGGCTGGCCGAGCTGGCCGTTCTCGTCGACGGCCCCCGGGCGCGTACCGCCGCCGCGCACGCGGCCGCCCTCGCCGAGCGCGACGGGCTCGCGCTGCACGCGGTGTCGCTGGAGTGGGAGCGCATGGGTGACCTGATCGCTGCCGCCGACGCCGCTGCCCAGGCCGCTGCCGCGCACGACCGCTGGAATCACGCCGCCCGACCGAGGACCGACGCCGGGCGGGCGCACCGGCTGGCCGAGGCGTGCCAGGGTGCCAGGACACCCGCGATCCGCGCCGCCGCACGCCCTCTGCCGATCACCGCGCGAGAGCGGGAGATCGTCGGCCTCGCCGGTGGTGGTCTGTCCAACCGGGACATCGCGGAACGGCTCGGGGTCTCCGTGCGCACGGTGGAGGGCCACCTCTACCGTGCCGCTGCCAAGCTCGGCGTCACCCGCCGGGCCGACTTCGCCGAGCTGCTGGGCAACGTCTGA
PROTEIN sequence
Length: 871
VGDRWPLVGRLSELQAIDAVVRQAGGGRGVVLAGAAGVGKTRLARAALANARRDGVLTRWVAGSESARTVPLGAFASVLPSVGSDPFRALGQASGALLAGAGQQGALVVVDDAHLLDELSATLVHQLAVGAAATVVLTVRTGEPAPDAVTAVWKDAYLDRLEVAPLTRAETGMFLEAVLGGPVEMVAATRMWRLSRGNALYLRELVVGERDAGRLTDLGGVWRWSGQPALSPKLVELVESRMGTVLDPAREVVDLLAFAGPLGVDVLGRLVDNSALESAETAGLVEVEADGQRLTTGLAHPLYGEVRRAATGVLRARGLRGRIATALLDTGARRADDELRCAALMLDSDLTLDPDLLSRAAGRSAQLLDLPLAVRLALAAVAAGAGFAARAIVAQSLTMQGWGAEAEAELRVLAELADTDVERAWVAAMRAGNMFLTLNDPATGDRLLTEALTAIPNVGAREILWALRSVFDSHLARPADARRAATVVLDAPCPQPISEFAARWGLTGALGLTGHADEVEAVASRAYLLANTFDTAVLRFNLAEFELLAYRLAGYLAQADAVAARCRDEAAEMPGVPLLFAAALTGHAELARGHLRDAVRWLREALAGFTVVDPAGRVFDCLLWLTQALATAGDTDAARRALADMEANRHHGFVYREPEVLLARATVAAAQGALSKAVALAREAAGTARAAGLAAYEVQALQTAVRFGDHGTAARLAELAVLVDGPRARTAAAHAAALAERDGLALHAVSLEWERMGDLIAAADAAAQAAAAHDRWNHAARPRTDAGRAHRLAEACQGARTPAIRAAARPLPITAREREIVGLAGGGLSNRDIAERLGVSVRTVEGHLYRAAAKLGVTRRADFAELLGNV*