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H1-18-all-fractions_k255_489577_5

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(3862..4782)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627506 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 298.0
  • Bit_score: 516
  • Evalue 9.40e-144
LysR family transcriptional regulator {ECO:0000313|EMBL:KDN22040.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 300.0
  • Bit_score: 508
  • Evalue 6.20e-141
bacterial regulatory helix-turn-helix , lysR family protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 304.0
  • Bit_score: 288
  • Evalue 1.50e-75

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGAGCACCTCGATCGACGACCTCCACTTCTTCCAGGTGGTCGCCGCCAGCGAGACGCTCACGGCCGCCGCCCGCGAGCTGGACTGCTCACTGCCGGTCGTCAGCAAACGCCTCCGGGCGCTGGAACGCCGGCTCGACGCGCGACTGGTGCGCCGCGGCACGCGCCGGCTCGCGCTGACCTCCGAGGGCGAGGTCTACGCCGCGCGCCTGGAGGCGATCCTCGACCAGGTTCGTGAGCTCGAGGACCTGGTCACGCACGGCTCCGGCGACCTGCGCGGCTCCGTCGTGGTGCAGGCGACGCTCGGCCTCGGACGAGCGCACGTCGCGCCGCTGCTCGGCGAGTTCTCCGCCCTGCACTCCCAGCTGAACATCCAGCTCCGCACGACGGCGCTGCCCCTGCGGCCCCATCGGCGCGAGTTCGACATGGCCGTCCACGTCGGAACACCACCGGACTCCGCACTGCGGATGCGGCGGCTGGCCAGGAACCGCCGGGTGCCCTGCGCGGCACCGTCCTATCTGGACCGCAAGGGCGTGCCCGAACGCGTCGAGGACCTGAGCGACCACGACTGCATCGTGCTCCGGGAGAACGAGGGCGACTTCGCCCTGTGGCGCTTCGGGGACGCCAGGAACCCGCGCCAGATACGCGTGCACGGCCGCCTGTCGAGCAACGACGGCGACGTCGTCACCGACTGGGCGCTGCAGGGGCGCGGGGTGATCATGCGCTCGGAGTGGCAGATCCGGTCCCACCTCGAGAGCGGCGCCCTGGTGCGGGTCCTGCCCGACGTGCCGACGCCGCCCGCCGACATCTACGCCCTGCTCCTCGACGACGTCCACGTGCCCCGACGGATCAGCGAGCTGGTGGCGCATCTCGCGGCGCGGCTACCGGACCGGATCGCCGGCCTTTCCCCTCGGGAAAGGTGA
PROTEIN sequence
Length: 307
MSTSIDDLHFFQVVAASETLTAAARELDCSLPVVSKRLRALERRLDARLVRRGTRRLALTSEGEVYAARLEAILDQVRELEDLVTHGSGDLRGSVVVQATLGLGRAHVAPLLGEFSALHSQLNIQLRTTALPLRPHRREFDMAVHVGTPPDSALRMRRLARNRRVPCAAPSYLDRKGVPERVEDLSDHDCIVLRENEGDFALWRFGDARNPRQIRVHGRLSSNDGDVVTDWALQGRGVIMRSEWQIRSHLESGALVRVLPDVPTPPADIYALLLDDVHVPRRISELVAHLAARLPDRIAGLSPRER*