ggKbase home page

H1-18-all-fractions_k255_552622_8

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(7823..10909)

Top 3 Functional Annotations

Value Algorithm Source
SARP family transcriptional regulator fused with ATPase domain n=3 Tax=Amycolatopsis mediterranei RepID=D8HLW6_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 1064.0
  • Bit_score: 825
  • Evalue 4.20e-236
SARP family transcriptional regulator {ECO:0000313|EMBL:KDN20945.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 1079.0
  • Bit_score: 826
  • Evalue 3.40e-236
SARP family transcriptional regulator fused with ATPase domain similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 1064.0
  • Bit_score: 825
  • Evalue 1.20e-236

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3087
GTGGACGCGACGGATACTTCGCCGGCATCGGCACGCGTGGGCGCCGGGCAGCGGTTCCAGCTGCTCGGGCCGGTACGTGCCTGGCGCGGGAAAGACGAACTCGACCTCGGCTCGGCCCACCGACGTGCGGTGCTGGCCGTGCTCGCCATGTCCGCCGGGCACACCGTCTCCCGTGACGAGCTGATCGACGCGCTGTGGGGCGACGAGCCGCCCTCCAGCGCGAGCGGCAGCATCTACACCTACGTCTCAGGCCTGCGGCAGGCGCTGGAACCGGGCCGGGCGAAGCGCTCCGGCGGCACCGTGCTGGCCTCCGTCGGCTCGGGCTACTCACTGCGGGCCGACCGCGCGGACGTCGACGTGCACCGGTTCGTCGAGCTGCGTGCCCGGGCCGCGAACGCGACCGACCCGCACGCCGCGCTCCGCGATCTCGACACGGCCCTGAACCTGTGGCAGGGGGACGCGTTCACCGGCATGCCCGGCCCGTTCGCGCAGGCCCAGCGCGCGAGGCTCGCGGAGCTGCGGCTGTCGGCCGTGGAGAGCCGGGCCGAGCTCCTGCTCGACCTGGACCGGCCGGAGGAGCTGGTCGCCGAGCTGACCGCGCTGTGCGGGGAGCACCCGCTGCGGGAACGCCTGCGGGTGCTGCTCATGCGGGCACTGCACGGCAGCGGTCGCACGGCCGAGGCGCTCGACGTGTTCGCCGACGCCCGCGCGGCGCTGGTCGAGGCGTCGGGCATCGAGCCGGGCCCGGAGCTGCGCAGGCAGCACCAGCAGCTGCTGTCCGACGAGCGCCAGCCGGAACCGGCGTGGCTGCCGCACCGCTCGGGTGTGCACGTCGGGCACAAGGAGGAGCTGGCCGTGCTGCGGGCCGCCCTCGCCGGTGTGCTGGCCGGGCGCGGCGGGGTGCTGTGGATCGACGGCGAACCGGGCATCGGGAAGTCCGCGCTGGTGGCCGAGGCGCTGTCCGGCGTGCCGATCCCCATGAAGCGGCTGCGCTGGGCGAGCGCGCAGGAGCTGGACAGCGAGCTGCCGCTGCGGTTCATCCAGGACTGCTTCGGCGTCACCGACCCGCTCGACGCGGTCGAGGAGATGTGCGCCGACGGCCCGCTGGTCGTGGTCGCCGACGACCTCCAGTGGGCGGACGAGGCCAGCCTGTCGGTGTGGTGGCGGCTGGCCCGGCACACCGACCGCCTGCCGCTGCTGCTGATCGGGTCGGCGCGGCCCATGCCGAGCACCCCGACGCACGAGAAGGTGCGGCGGTACCTGACCGGCCGCACGCTCACCCTGCCACCACTGTCCACGCTGGACTCCTACCGGCTCGCGGAGAAGCTGACCGGCGCGCCGCCGGAGGGCAGGTTGTGCGGCTGGCTGGACGACGCGGCGGGAAACCCGTACTACGTCAGGAAGATCGTCGCGACGGTCGCCGGCGAGCTGCTGGGTGGCGCCGGTGTGCCCACAGTGGACGACGGCGCACTGCCGCCGCAGCTGGTCTCCTGGATCGACGACCACCTCGCGTTCCTGTCCGGGCCGACGCGCGCGCTCCTGCGGTGGGCACGGCTGCTGGGCAGGGAGTTCACGCTGACCGACCTCGCGGCGGCGGCCGGGCGGCGGCCCGCCGAGCTGGCCGACCCGCTGGACGAGGCGCTGACGGCCGGTGTGCTCACCGCCGCCGGCGACCGGTTCCGGTTCCGCCACCCGCTCGTCGCGCGGGCACTGTACGAGAAGACCCCGAACGCCATCCGCGTCGCACTGCACCTGCAGGTGGCCGAGGCGCTCGCCGAGGCCGGTGCCCCGCCGGTGCGCGTCGCCGAGCAGCTCGAGGCCTCGACGCTCACCGGGCCGCTGGTCAGCACGTGGTTGCCGGCCAACATCGGCGCGGTGGCGGCCGAGGAGCCCGAGATCGCCGTCCGCCTGTTACGCCTCGCGGTCACCTCGGCGCCGGCCGGGACGCGCGAGGCGCTGACGGCCACGCTCACCCGGCTGCTGTTCTGGCTGGGCAGCGAGCCGGAGGCGGAGGCGCGGTCGCTGATCGCCCGGACGACCGATCCCGAGCTGGCCGCCGAGATGCGGTGGGTGCTCGCGTACGGCTACAGCCGGTGCGATCGCGACGAGGACGCGCGGCACGAGGTGGCGCGCGCCCTGTCCGACGGCGCGACCGGTCCGTGGCGGGACCGGCACGAGCTGCTGCTGGCCGCCCTGGACGACCCGCCCCCGGCCGGTCCGCCGGGGCTGGGCGAGTACCGGCTGCTGGACGAGGACACCCGCACCGCGCTGGAGCACGCGGGTTCGGCCCTGCCGGTCACGACGTGGCAGCTGGCGATGCACCGGGCCATGCCGGCGGAGCTGCACATGACCAACGCCATGAACGAGTTCTGGAACGGGCGGTGGGACGCGGCACAGGCCGAGCTGGACATCATCGCGGCGAGCGAGCGCGACCCGGCGTCGTACGTGCTGCGCCGACCGACCGTCGCGGCCGCGGTGGCGGGCGCGAACGCGTTGATCGCCGCGCACCGGGCCGACCGGGGCACGGCGTGGCGCCACCTGCGCCTCGCCCGGCGGCACGCGCAGGCGTCCGGCAACAGGCCGCTGGCGGTGCTGCTCGCGGCCCGGGCGGCCCTCGCGGAGCTGGCCGGCAAGCCGCGGGAGGCGCTGGACGCGCTCGCGCCCCTGCTGGACGTCGAGGTGCTGCCGCCGCCCTGGTACCGCTGGCTGCCGGACCTGGCCAGGCTGGCGGTGCTGGTCGGCGACCGGTCGCGGACCGACCTGCTGCGCGGGCTGCTCGAACGCCTGCCGGCGCGGCCGCTGCCGGTGGAGGCCAGGATGCTCCTGAGCTACTGCCACGGCATCCTCGCCGAGGACCCGGACGAGGTGCGTGCGGTGGTGACGTTCTGCCGCGTCGCCGGTGGGCTGGAGCTGATGCGGGGTCAGGCGCTGGCCGACGTGGCCTGGCTGCTCGCGCGCCGCGGCCAGGCCCGCGAGGCGCAGGACGTCCTGGGCGACGCGGTGACGGCCTACCGCGCGATCGGCGCGGAGACCGCCGTCCAGCGGGCGGAGGCCGCGGTCTGGCGCCCACCGGCTCTGGTGTCATGA
PROTEIN sequence
Length: 1029
VDATDTSPASARVGAGQRFQLLGPVRAWRGKDELDLGSAHRRAVLAVLAMSAGHTVSRDELIDALWGDEPPSSASGSIYTYVSGLRQALEPGRAKRSGGTVLASVGSGYSLRADRADVDVHRFVELRARAANATDPHAALRDLDTALNLWQGDAFTGMPGPFAQAQRARLAELRLSAVESRAELLLDLDRPEELVAELTALCGEHPLRERLRVLLMRALHGSGRTAEALDVFADARAALVEASGIEPGPELRRQHQQLLSDERQPEPAWLPHRSGVHVGHKEELAVLRAALAGVLAGRGGVLWIDGEPGIGKSALVAEALSGVPIPMKRLRWASAQELDSELPLRFIQDCFGVTDPLDAVEEMCADGPLVVVADDLQWADEASLSVWWRLARHTDRLPLLLIGSARPMPSTPTHEKVRRYLTGRTLTLPPLSTLDSYRLAEKLTGAPPEGRLCGWLDDAAGNPYYVRKIVATVAGELLGGAGVPTVDDGALPPQLVSWIDDHLAFLSGPTRALLRWARLLGREFTLTDLAAAAGRRPAELADPLDEALTAGVLTAAGDRFRFRHPLVARALYEKTPNAIRVALHLQVAEALAEAGAPPVRVAEQLEASTLTGPLVSTWLPANIGAVAAEEPEIAVRLLRLAVTSAPAGTREALTATLTRLLFWLGSEPEAEARSLIARTTDPELAAEMRWVLAYGYSRCDRDEDARHEVARALSDGATGPWRDRHELLLAALDDPPPAGPPGLGEYRLLDEDTRTALEHAGSALPVTTWQLAMHRAMPAELHMTNAMNEFWNGRWDAAQAELDIIAASERDPASYVLRRPTVAAAVAGANALIAAHRADRGTAWRHLRLARRHAQASGNRPLAVLLAARAALAELAGKPREALDALAPLLDVEVLPPPWYRWLPDLARLAVLVGDRSRTDLLRGLLERLPARPLPVEARMLLSYCHGILAEDPDEVRAVVTFCRVAGGLELMRGQALADVAWLLARRGQAREAQDVLGDAVTAYRAIGAETAVQRAEAAVWRPPALVS*