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H1-18-all-fractions_k255_731094_4

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(6258..7169)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 303.0
  • Bit_score: 510
  • Evalue 1.20e-141
Transcription-repair-coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 302.0
  • Bit_score: 506
  • Evalue 2.70e-141
Transcription-repair-coupling factor n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZSP0_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 303.0
  • Bit_score: 499
  • Evalue 1.50e-138

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GAGAAGCGCTTCGACGTGCTCGTCTGCACCACCATCGTCGAGAGCGGCCTGGACATCTCCAACGCCAACACGTTGATCCTGGAGCGGTCCGACGTGATGGGCCTCTCGCAGCTGCACCAGCTGCGCGGCCGCGTCGGCCGCGGTCGCGAGCGCGGGTACGCGTACTTCCTCTACCCGCCGGAGGCGCCGCTCACCGAGACCGCCCACGACCGGCTCGCCACGATCGCCCAGAACACCGAGCTGGGCGCGGGTATGGCGGTGGCCATGAAGGACCTGGAGATCCGCGGCGCCGGCAACATCCTCGGCGCGGAGCAGTCCGGCCACATCGCCGGCGTCGGCTTCGACCTCTACGTGCGGCTCGTCGGCGAGGCGGTCGAGGCGTTCCGCAAGCACGCCGGCGCCGAGCCGGGCGAGGAGGAGGAAGAGCTCGCCGAGGTGCGGGTCGACCTGCCGGTCGACGCCCACATCCCCCACGACTACGTGCCGGGTGAGCGGCTGCGGCTCGAGGCCTACCGCAAGCTCGCCGCCGCGCCGGACGCCGACGGGCTCACCGCCGTCGAGGAGGAGCTGCAGGACCGCTACGGCACGCCGCCGCTGCCCGTGCGGCGGCTGTTCGCGGTCGCCGCCTTCCGGCAGAAGTGCCGCGACCATGGCGTCCGCGAGGTAGCCCTGCAGGGCAGCTCGATCCGGTTCGCGCCCCTCGAGCTGCGCGACTCGCAGCTCGTCCGGCTGCGGCGGCTGTATCCCAAGGCGAACTACAAGGCCGTGAGCCAGCTCGTCACCGTGCCGCGGCCGACCGAGGGCGCCGCGGGAGGCCGGATCGGCGCTCCGCCGCTGCGGGACGTCGAGCTGCTGGAGTGGTGCGCGAAGTTCCTGGAGTCGCTGGTGATTGCCCCCGCGCCGGTGGGATAG
PROTEIN sequence
Length: 304
EKRFDVLVCTTIVESGLDISNANTLILERSDVMGLSQLHQLRGRVGRGRERGYAYFLYPPEAPLTETAHDRLATIAQNTELGAGMAVAMKDLEIRGAGNILGAEQSGHIAGVGFDLYVRLVGEAVEAFRKHAGAEPGEEEEELAEVRVDLPVDAHIPHDYVPGERLRLEAYRKLAAAPDADGLTAVEEELQDRYGTPPLPVRRLFAVAAFRQKCRDHGVREVALQGSSIRFAPLELRDSQLVRLRRLYPKANYKAVSQLVTVPRPTEGAAGGRIGAPPLRDVELLEWCAKFLESLVIAPAPVG*