ggKbase home page

H1-18-all-fractions_k255_2482252_4

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3307..4557

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FYN9_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 320.0
  • Bit_score: 365
  • Evalue 3.70e-98
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EOD64433.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 320.0
  • Bit_score: 365
  • Evalue 5.10e-98
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 421.0
  • Bit_score: 243
  • Evalue 5.90e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGCTTGGGAAGGGTGACCAGACCATAGGGCCGACGCTGCGTGCTCTACGGGAGGAAGCAGGCAGGTCGCAGTCCGAGCAAGCGGATATGCTGTCCGGCCTCGCTGGGCGAGCCGTCACCCGCAACGAGGTATCACGCTGGGAGGCCGAACGTCGCCTGCTCACGCCGTTCTGGCAGGGTCACTTTGCCACGTCGTTCGGTGTCCCGGTGGACGTGCTCCGGGGAGCAGTCGGGGCTACGAAGGCGAAGCGGCGACGCGACCAACAGCAAGAGGAGGGCGATTCGGTGCGGCGGCGGCAATTTCTCGGCACCCTCGCTGGCCTCGCGGTGCCGGCCGTTGGGCTTGTCGAACTACCGCGGCGCGGTCAACTCGGGTTGTCCGATATCGACTGTCTGTACCGGCAAACTGCACGCTTACGTCGACTCGACGACGTCCTTGGTGGTGCCGATACCTATCACCTCTACGCCACCCAGGTCACCACGACAGAGAGCCTGTTCGCCAACGCCCGATACTCCCAGGAGGGCGGTCGGAGGCTGCGCTCGCTGCTCGGTGAGCAACACCAGTTGGCCGGCTGGGCAGCATTCGACGCTGGGCTCCACGCACAAGCCCGGCAGCACTACATGGACAGCTTGACCGCCGCCCGAGAGGCCGACAACGCTGCGCTGGCCGGCAACGCGCTGGCGTTCGTGGCGTACCAGGAGACCGCCACCAACCGCAATGGAGCCGGTACAGCCCAAGCCTCACACGATGCCGCTCGCGATGTGGCCACCCCGCGGGTCGAGACGCTGCTTCTCGAACGAAAGGCATTTGCCCACGCCGCAGTCGGCGACGCCCAACAAGCTGACACCGCACTCGCGCAGGCGCGAGAGGCCCTCCAACGCGTCGACCACCGACCCGAGCCGGACTGGGTGTTCTGGGTCAATGAACAGGAGATCGACATCATGGCCGGCCGGTGTTGGACCGAGCTTCGTCAACCGCTGCGCGCCGTGCCCGTGCTCGAACAGGTCCTGGCCGGCTTCGATGACACCCATGGCCGCGACAAGGCGCTCTACCTCACCTGGCTGGCCAGCTCCTACCTCCAGGCCCGTGAGGTCGAGCAGGCTGCCGCCACCCTGATCCGTGCCCACGACCTGTCCATTGGTGTGGCCTCCGTACGGCCCGCTGGCCGCATCGCCAAAGTGGCCCGCCAACTCGCCCGGCACCGCGCCGTTCCCGAGGTCTCGCTCGCACTCGACCGGATCCGCCGCTAA
PROTEIN sequence
Length: 417
MLGKGDQTIGPTLRALREEAGRSQSEQADMLSGLAGRAVTRNEVSRWEAERRLLTPFWQGHFATSFGVPVDVLRGAVGATKAKRRRDQQQEEGDSVRRRQFLGTLAGLAVPAVGLVELPRRGQLGLSDIDCLYRQTARLRRLDDVLGGADTYHLYATQVTTTESLFANARYSQEGGRRLRSLLGEQHQLAGWAAFDAGLHAQARQHYMDSLTAAREADNAALAGNALAFVAYQETATNRNGAGTAQASHDAARDVATPRVETLLLERKAFAHAAVGDAQQADTALAQAREALQRVDHRPEPDWVFWVNEQEIDIMAGRCWTELRQPLRAVPVLEQVLAGFDDTHGRDKALYLTWLASSYLQAREVEQAAATLIRAHDLSIGVASVRPAGRIAKVARQLARHRAVPEVSLALDRIRR*