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H1-18-all-fractions_k255_2500636_3

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1056..1652)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B6B4_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 178.0
  • Bit_score: 229
  • Evalue 1.90e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 178.0
  • Bit_score: 229
  • Evalue 5.50e-58
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEH08088.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 178.0
  • Bit_score: 229
  • Evalue 2.70e-57

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGACAGCAGATCAGGCGGCGGCTGATCTGTCCGCCGCGGTGCGGGAAGCCCGCGGTGGCGACGAGGAGGCGTTCCGGCAGCTGTACCGGCAGGTGCAGCCCGGTCTGCTGCGGTACCTGCGCGGCCTGGTCGGCGACGACGCGGAGGACCTCGCCTCGGAGACGTGGCTGCAGATCGCCCGCGACATGCGCTCGTTCCGCGACGAGGGCGCCGGCTTCCGCGGGTGGGCGCTGACCATCGCCCGGCACCGCGCGCTCGACCACGTCCGCCGCAACCAGCGAAGACCCGTCACGGGCGTGCCCGTGGACGTCCTGGCCGACCTCCCGGACGACCAGGACACGGCCGAACAGGCGATCCGCCTCGCGACCACCAACGCCACCATCGCGTTCATCGCCACCCTGCCGAGGGACCAGGCCGAGGCCGTGCTCCTGCGGGTGGTGGTCGGCCTGGACGTCAAGGCCACCGCCAAGGTCATGGGCAAGCGCCCGGGCGCCGTGCGGACGGCCGCCTGGCGCGGGCTGCGAACACTGGCCGAACGGTTGACGAGCACAGGTGTGACACGAGCGGGGGCCGGTACGCCTAGGGAAGTGAGATGA
PROTEIN sequence
Length: 199
VTADQAAADLSAAVREARGGDEEAFRQLYRQVQPGLLRYLRGLVGDDAEDLASETWLQIARDMRSFRDEGAGFRGWALTIARHRALDHVRRNQRRPVTGVPVDVLADLPDDQDTAEQAIRLATTNATIAFIATLPRDQAEAVLLRVVVGLDVKATAKVMGKRPGAVRTAAWRGLRTLAERLTSTGVTRAGAGTPREVR*