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H1-18-all-fractions_k255_2506876_20

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(20359..24774)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RHS repeat-containing protein n=3 Tax=Amycolatopsis mediterranei RepID=D8I8D3_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 1417.0
  • Bit_score: 1146
  • Evalue 0.0
RHS repeat-containing protein {ECO:0000313|EMBL:AEK39930.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 1417.0
  • Bit_score: 1146
  • Evalue 0.0
RHS repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 1417.0
  • Bit_score: 1146
  • Evalue 0.0

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4416
ATGACCACCGAAACCAACCCGCTGGTCGCGCAGGCGCAGGACAGCCCGCGGTGGTTCAGCGGGATCGGCGCCGTCGAGGGCCTCGACGGGCTGATCAGCGGCATCGAGAACGGCAGCTGGATCGAGGCCGGCCTCGGCACCGTGGGCACGGCGCTGGAGACCGCCTCCGTCTACTTCGACCCGATCGGCACGCTGCTGCGCTGGGCCGCCTCCTGGGTGATGGAGCACCTCGAGCCCGCCCGCAAGATGCTCGACAAGCTCGGTGGCAACCCGCCGGTCATCGACGCCTACGCCCAGACCTGGACCAACGTCGCCACCGCGCTGTCCGGCAACGCCGACCAGCTCGAGTCGGCCGTGAAGACCGACATCGCCACGTGGAAGGGCGACGCGGCGGACACCTACCGCGGGGAGGCGGCGGAGAAGATCACCGCCATGCGGGAGGCCGCGAAGCTCTGCGCGTCCAGCGGCAAGCAGATGTCCCTGGTCGGCGGGCTGGTCGGTGCCGTGCGGACGATGGTCCGCGAGGCCATCTCGGCGCTGGTCGCGTGGCTGGTCAAGTCGATCGGGCTGACCGTGCTGACCGGACCGTTCGGTGCCAGCGAGGCCGTGCGCACGGCGATCAGCGAGATCGGCCGCGTCACCTCGATGATCAGCAACACGATCGCCAAGCTGCTGCGCTCGCTGGCCAACCTCAAGGGCCTGCTGCCCAGGTTGCTCGAGGCGTTCGACACGGTCGTCGCGAAGCTCGCCCCCAAGGGCGCCCGCGCCGCCGAGAGCTCGGCGACGCGGGCGGCCGAGGCCGTCGACGTGGTGCCGCCGCCCCGCGTGCACGAGCCCACCCCGGCCACGCCCCACGAGACGCCGAACGGCCAGGGCACCCACGCGGCGGTGGAGGACGGCGCCGTCGGCGGGCAGAAGTCGGAGGGCAACCGCGGCACCGACGCCCGCGGCGGCGACCCGGTGGACGCCGTCTCCGGCCAGATGATCACCAGCGCCACCGACGTCGACCTGCCCGGCCTGCTGCCGCTCGTCCTGCGGCGTGCCTACGCCTCCGGCTACCGCGGCGGCCGGCTGCACGGCCCCGGCTGGTCGTCCACACTGGACCAGAGACTCGAGGTCGGCGCCGACGCCGTCGGCTACTTCGGTGACGACGCCCAGGTCCTGCTGTACCGCGAGCCGAGCGGTGCCACGCTGCCCGTCGCCGGCGCGCGCTGGCCGCTGACCTGGGACGCCGACACCGACACCTACCGCGTAGAGGACCCGGGGACCGGCCTGGTCCGTCACTTCGGTCCCCACCCCGCCGGCTACTCGACGCGCCCGATCACCGCGCTCACCGACCGCAACGGCAACCGCGTGGACTACCGGTACGACGAGGAGGGTTACCCGACCGAGGTCGTCCACCCCGGCTACCGCGTCGCCGTCACGACCGCGGTCACGTCCGGCGGCGTGCGCGTGACCGGCCTGCGCCTGCTGCCCGCGCACGCCGCCGACGTCACCCTGGCCGAGTACCGCTACGACGACCGCGGCCGGCTCACCGAGGTCGTGGACACCGCCGGCCGGCCCTACCGCTACGAGGTCGACGACGCCGACCGCGTCACCGGCTGGGTGGACCGCGCCGACCACCGCTACCGCTACCACTACGACGCGGCCGGCCGGGTCGTGCGCGGCGAGGGCGACGGCGACTACCTGACCGCCGACTTCCACTACGACCCCGCCGCGCGGACCACGACCGTCACCGACAGCCTCGGCGGGCGGACCGTCTACCACTACGACGAGAACCAGCACCTCACCAAGGTGGTCGACCCGCTCGGCAACACCGAGCTGACCGAGTACGACGACTACCACCACCTGGTGTCGCACACCGACCCGCTCGGCGCCACCACCCGCTACACCCGCGACGCCGACGGCAACCCGACCCACATCGAGCGCCCGGACGGCACCACGGTCCACGCGACCTACGACGAGTCCGGCCGGCCGGTCGAGATCACCGGTCCCGACGGCGGGCGGTGGCGCTACGTCTACGACGAACGCGGCAACCTCACCGCCGAGGTCGACCCGGCGGGCGCGGTGACCAGCTACGGGTACGGCGAGCACGGCGAGCCGCGGCTGATCGTCGACGCGCTGGGGCACGCCACCACCGTCACCACCAACGCGGCCGGACTCGCGACCTCCGTCGCGGACGCCGGCGGCCGGGCCGTGACCTACACGCTGGACGAACGCGGCCGCGTGGTCGCCGTCACCGACCCGCTCGGCGCGGTCACCACCACCGAGTGGGGACCGGCCGACGAACCCGTCCGCCGCACCCACCCGGACGGCACGAGCGAGACCTGGCGGTACGACGGCAACGGCGACCTGGTGGAGCAGACCGGACGCACCGGGTTCGTGACCCGCTTCGAGGTCGGGCCGTTCCACCTGGTGACCGCGCGCACCGACCCCGACGGGGCGCGGCACACCTTCACGCACGACACCGAGCTGCGCCTGACCGAGGTCGTCAACCCGCAGGGCCTGCGGTGGCAGTACACCTACGACCTGGCCGGCCGCCTGGTCGGCGAGCAGGACTTCAACGGCCGCGCCGTCGCCTACGCGCACGACGCCGCCGGCCGGCTCACGAGCCTCACCGACAGCGCGGGGCAGACGGTCGAGGTCACGCACGACGAGCTGGGGCGCATCACCGCGCAGCGCGGCGAGGGCCTGCACGCCACGTTCGGCTACGACCGCGCCGGTCGCCTGGTCAGCGCGGACAACGCGGACGCGGAGGTCCGGCTCACCCGCGACCCGATGGGCCGGGTGCTCACCGAGACGGTCAACGGGCGCACGCTCACCGCCACCTACGACCCGATCGGCCGGCGGCTGTCCCGGACCACCCCGGCGGGCCACACCTCCACCTGGCAGTACGACTCGACCGGCCGACCCACCCGGCTGACCTCGGCCGCGCTGCCGATCACCTTCGAGTACAACGCCGCGAACCAGGAGACCCGCCGCTGGCTCGGCCCCCGCGTGGCGCTGACCAGCACGTGGGACGGCACCGGCCGGCTGGCCGCCCGCCGGCTGGTCGGCGCGGACGGCACCGGCGCCGGCCGGGTGCTGCACAGCCGCGCCTGGACCTACCGCGCCGACGGCGTGCCGGTCTCGATCGCCGACAGCGCGGCCGGCGTCGCGCGCTTCGACCTCGACCCGATCGGCCGGGTCACCACCGTCCGGGCCGAGGGCTGGACCGAGCACTACGCCTACGACCTCACCGGCAACATCACCTTCGCCGCCGACACCCGCGCCGGCGACTCCCCGGTGGCCGGCCCCCGGGAGGCCACCGGCACGCTGCTGCGCCGCGCCGGCCGCACCCACTTCGACCACGACACCCAGGGCCGGCTGGTCCGCAAGCTGCGCACCACGCCGTCGGGCACGCGGCAGGTCTGGCACTACCGCTACGGCGTGGGCGACCGCCTGGTCGAGGCGGTCAACCCGGCCGGACACCGCTGGCGGTACCGCTACGACGCGCTGGGCCGGCGGATCGCCAAGCAGCGCGTCGGCGACGACGGTGGCCTGGTCGAGGAGACCAGGTTCGCCTGGGACGGCGAGATCCTGGTCGAGCAGGAGCAGGTCGACGCCGGTGTGGTCACCGCGACCTCCTGGGACTACGAGCCCGGCGCGTGGGCACCGGTCAGCCAGGACCGGCGCACGTTCCACGCCGACGCGCCCCAGCACGTGATCGGCCGGCAGTTCCACGCGATCGTCACCGACCTCGTCGGCGCCCCGACCGAGCTGATCACGCAGGACGGCCGCGTCGACTGGCGCCGGCAGGCCGACCTGTGGGGCAACCACTACCGCACCGCGGCCTCGGGCACGAACTGCCTGCTGCGCTTCCCCGGCCAGTACCACGACCACGAGACGGGCCTGGACTACAACGCCCACCGGTACTACGACCCGGAGACCGGCCGGTACACCACCCCCGACCCGCTGGGCCTCGACCCGGCACCCAACAACCACGGCTACGTGACCAACCCGCTGGCCTACCTCGACCCGCTCGGCCTCATCAGCGACACCCGCTTCGGGCGGCTGGACCGGCCGGGCTGGCGCAACTACGTCCTCAAGGACGCGGCGGGCGAGGTCTACTACTCGGGGATCTTCGGGCCGACGATGACCGCGGCCGACACCGAAGCCCGGCACGCGGCCAACCACAACCGGTTCAACGCGGCGAACGGCGACAACCTCGAGGTCAAGGCCGGCACGCGCACCTACGGCGAGTCCCGGCTGATGGAGAACGACCTCGCCCGCGACCACGGCACGTTGATCGGGCGTGACGGCGACAACTATCGTGGCAACCGGCAGCGGCCGATGGACGACAAGCGGGTCGCCGAGTACCAGGAATACATGCGGCGGAAGCAGGCCGGTGGCACAGGCGCAGGAGGATGTGGGTGA
PROTEIN sequence
Length: 1472
MTTETNPLVAQAQDSPRWFSGIGAVEGLDGLISGIENGSWIEAGLGTVGTALETASVYFDPIGTLLRWAASWVMEHLEPARKMLDKLGGNPPVIDAYAQTWTNVATALSGNADQLESAVKTDIATWKGDAADTYRGEAAEKITAMREAAKLCASSGKQMSLVGGLVGAVRTMVREAISALVAWLVKSIGLTVLTGPFGASEAVRTAISEIGRVTSMISNTIAKLLRSLANLKGLLPRLLEAFDTVVAKLAPKGARAAESSATRAAEAVDVVPPPRVHEPTPATPHETPNGQGTHAAVEDGAVGGQKSEGNRGTDARGGDPVDAVSGQMITSATDVDLPGLLPLVLRRAYASGYRGGRLHGPGWSSTLDQRLEVGADAVGYFGDDAQVLLYREPSGATLPVAGARWPLTWDADTDTYRVEDPGTGLVRHFGPHPAGYSTRPITALTDRNGNRVDYRYDEEGYPTEVVHPGYRVAVTTAVTSGGVRVTGLRLLPAHAADVTLAEYRYDDRGRLTEVVDTAGRPYRYEVDDADRVTGWVDRADHRYRYHYDAAGRVVRGEGDGDYLTADFHYDPAARTTTVTDSLGGRTVYHYDENQHLTKVVDPLGNTELTEYDDYHHLVSHTDPLGATTRYTRDADGNPTHIERPDGTTVHATYDESGRPVEITGPDGGRWRYVYDERGNLTAEVDPAGAVTSYGYGEHGEPRLIVDALGHATTVTTNAAGLATSVADAGGRAVTYTLDERGRVVAVTDPLGAVTTTEWGPADEPVRRTHPDGTSETWRYDGNGDLVEQTGRTGFVTRFEVGPFHLVTARTDPDGARHTFTHDTELRLTEVVNPQGLRWQYTYDLAGRLVGEQDFNGRAVAYAHDAAGRLTSLTDSAGQTVEVTHDELGRITAQRGEGLHATFGYDRAGRLVSADNADAEVRLTRDPMGRVLTETVNGRTLTATYDPIGRRLSRTTPAGHTSTWQYDSTGRPTRLTSAALPITFEYNAANQETRRWLGPRVALTSTWDGTGRLAARRLVGADGTGAGRVLHSRAWTYRADGVPVSIADSAAGVARFDLDPIGRVTTVRAEGWTEHYAYDLTGNITFAADTRAGDSPVAGPREATGTLLRRAGRTHFDHDTQGRLVRKLRTTPSGTRQVWHYRYGVGDRLVEAVNPAGHRWRYRYDALGRRIAKQRVGDDGGLVEETRFAWDGEILVEQEQVDAGVVTATSWDYEPGAWAPVSQDRRTFHADAPQHVIGRQFHAIVTDLVGAPTELITQDGRVDWRRQADLWGNHYRTAASGTNCLLRFPGQYHDHETGLDYNAHRYYDPETGRYTTPDPLGLDPAPNNHGYVTNPLAYLDPLGLISDTRFGRLDRPGWRNYVLKDAAGEVYYSGIFGPTMTAADTEARHAANHNRFNAANGDNLEVKAGTRTYGESRLMENDLARDHGTLIGRDGDNYRGNRQRPMDDKRVAEYQEYMRRKQAGGTGAGGCG*