ggKbase home page

H1-18-all-fractions_k255_2524947_12

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 8955..11123

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262654C similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 727.0
  • Bit_score: 851
  • Evalue 5.00e-244
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 727.0
  • Bit_score: 841
  • Evalue 1.10e-241
Integral membrane protein {ECO:0000313|EMBL:AIJ23625.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 727.0
  • Bit_score: 841
  • Evalue 5.50e-241

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2169
ATGTTCGGACGGATCGGGCGGTTCGCCGCGACGCATGCGCGAAGCGTGCTTCTGGTGACCTTGCTGGTCGTGGTCGGTGCCGGCGCGCTGGGCTTCACCGCGTTCGGCAAGCTGAAGTCCGACGGCGGGTTCGTCGACCCGGCGGCCGAGTCCAGCAGGGCGCAAGAACTGGTCGACCGGCGGTTCGGCGGCGACAGCGACATCGTGTTCCTGCTCTCGCCCGCCACGGGCACGGTCGACGACGCGGCCAACCAGCGGGCCGGCGCCGAGCTGACCGACAGGCTCACGAGCGACCGGGGGCTCGCCGACGTCGTCTCGTACTTCACGACCAGGGCGCCGCAGCTGCGTGCCGAGGACGGACGGCACGCGCTCGTGGTCGCCAAGCTGACGGGCACCGACGAGGTCGAGCGGCTGCGCGAGGCCTACGCCACCGGGTCCGGCCCGCTCCAGGTCCGCGTCGGCGGGCCGGGCGCGGTCGGCACCGACATCGGTGACCAGGTCGGCGGCGACCTCGCGCTGGCGGAGTCGATCGCGGTGCCGATCATCCTGGTGCTGCTCGTCATCGTGTTCGGCAGCGTGATCGCCGCGCTGCTGCCGCTGGCCATCGGCGCGCTCGCGGTGCTCGGCACGTTCGCCCTGCTCGCGGTCCTCGGCTCGGTCACGGACGTGTCGGTGTTCGCGATCAACCTGACCACCGCCCTCGGGCTCGGCCTGGCGATCGACTACGCGCTGCTCATGGTGTCCCGGTTCCGCGAGGAGCTCGACAAGGGGCAGGACCCGGTCGAGGCCGCCGCCCGCACGGTCGCCACGGCGGGCCGGACCATCATGTTCAGCGCGCTGACGGTCGCGGTCGCGCTCGGTGTGCTGATGATGTTCCCCCTGTACTTCCTGCGCTCCTTCGCGTACGCGGGCGTCGGCGTGGTGCTCATCGCGATGGTGAGCGCGCTCGTGGTGCTGCCGGCGCTCCTCGGGCTGCTCGGCGGTCGCGTCAACTCGCTGCGGTTGCCGTGGCTGAAGCGGACGCCCGGCTCGGCGTCGGCCGTGTGGGCGCGGATCGCGTCGGTGGTTCTGCGCCGGCCCGTGCTGACCGGCCTGCCGGTGGTGCTCGTGCTGGTCGCGGCGGCGGTTCCGCTTCTGGGCGTGCGGTTCGGCACGCCGGACGACCGCGTCCTGACGACCGCGGCACAGACCAGGGCCGTCGGCGACGTGCTGCGCGCGGACTTCCCCGGCGACGACGCCAGGATGCTGGACGTGGTGACCACCTCGCCGGTGGGCAGCAACATCGTCGGCGACTACGCGCTCGCGCTGTCGGAAGTCAATGGGGTGAGGTCGGTGACCGCGAGCGTCGGCACGTTCGTGGACGGCAGGGCGGTCGGCGGGGGCAACCCCGCGTACGCGTCGGAGACCGGGCTGCAGCGGTTGGCGGTGCAGAGCGCCTACGACCCGCACTCGACGCAGGGGCAGGACCTGGTGGCGGCGGTGCGTGCACTGCCGGTGGACGGCGTGAACGGGGTGGACGCGCTGGTCGGTGGCAACGCGGCGCAGCTCGTGGACAGCAAGGACGCGATCGGCAGCAGGTTGCCGCTGGCGGCGGGTCTGATCGCGGTCAGCACGTTCGTGCTGCTGTTCCTGTTCTCGGGAAGCGTGTGGCAGCCGATCCGGTCGCTGCTGTTCAACGTGCTCGGTCTGTCGGCGACGCTGGGTGTGCTGGTGTTGGTCTTCCAGCACGGGTGGCTGTCGTCGTGGCTGGGGTTCACGCCGCTGCCGCTCGACACGGCCATGCTGGTGCTGCTGTTCTGCATCGTGTTCGGGCTGTCGATGGACTACGAGGTGTTCGTGCTGAGCCGGATCAAGGAGGCGCACTCTCAGGGCGCCGGCCTGGAGGAGGCGGTGACGCACGGGCTGTCCCGAATCGGCCGGATCGTGACGGCGGCGGCGACGCTGCTCGCGGTGAGCCTGCTGGCGTTCGGGACGAGCGGGGTGAGCTTCATCCAGATGTTCGGGATCGGCAGCGGCCTGGCGATCCTCGTGGACGCGACGCTGATCCGGGGGGTTCTGGTGCCGGTCGGGATGCGGGTGCTGGGGCGCGCGGCGTGGTGGGCGCCGCCGGTTCTGCGCCGCGTGCACGACCGGGTGGGGTTGCGTGAGGAGGAACCCGCTGCTGTGTGA
PROTEIN sequence
Length: 723
MFGRIGRFAATHARSVLLVTLLVVVGAGALGFTAFGKLKSDGGFVDPAAESSRAQELVDRRFGGDSDIVFLLSPATGTVDDAANQRAGAELTDRLTSDRGLADVVSYFTTRAPQLRAEDGRHALVVAKLTGTDEVERLREAYATGSGPLQVRVGGPGAVGTDIGDQVGGDLALAESIAVPIILVLLVIVFGSVIAALLPLAIGALAVLGTFALLAVLGSVTDVSVFAINLTTALGLGLAIDYALLMVSRFREELDKGQDPVEAAARTVATAGRTIMFSALTVAVALGVLMMFPLYFLRSFAYAGVGVVLIAMVSALVVLPALLGLLGGRVNSLRLPWLKRTPGSASAVWARIASVVLRRPVLTGLPVVLVLVAAAVPLLGVRFGTPDDRVLTTAAQTRAVGDVLRADFPGDDARMLDVVTTSPVGSNIVGDYALALSEVNGVRSVTASVGTFVDGRAVGGGNPAYASETGLQRLAVQSAYDPHSTQGQDLVAAVRALPVDGVNGVDALVGGNAAQLVDSKDAIGSRLPLAAGLIAVSTFVLLFLFSGSVWQPIRSLLFNVLGLSATLGVLVLVFQHGWLSSWLGFTPLPLDTAMLVLLFCIVFGLSMDYEVFVLSRIKEAHSQGAGLEEAVTHGLSRIGRIVTAAATLLAVSLLAFGTSGVSFIQMFGIGSGLAILVDATLIRGVLVPVGMRVLGRAAWWAPPVLRRVHDRVGLREEEPAAV*