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H1-18-all-fractions_k255_6378611_1

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2..1054

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 350.0
  • Bit_score: 501
  • Evalue 4.70e-139
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 350.0
  • Bit_score: 501
  • Evalue 1.30e-139
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CAN96584.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 350.0
  • Bit_score: 501
  • Evalue 6.60e-139

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
AAGCGGCGTGCCATCGACATGTTCCGCCGCCGTGAGACGCTCGACCGCAAGGTCACCGAGATCGGCCGCGACCTGGAGACCCAGGAGCCGCCGACCGCCGAGCCGGACTTCGACGCGATCCACTCCACCATCTCCGACGACCTGCTCCGGCTCGTCTTCATCTCCTGCCACCCGGTGCTGTCCACCGAGGCCAGGGTGGCGCTCACGCTGCGGCTGCTCGGCGGGCTGACCACCGAGGAGATCGCCCGGGCGTTCCTCACCCCCGAGCCGACGATCGCGCAGCGGATCGTGCGCGCCAAGAAGACACTGGCGCAGAAGAAGATCCCGTTCGAGGTGCCGTCCGGGAGCGAGCTGGGGGAGCGGCTCGCGTCCGTGCTCGAGGTCGTCTACCTGGTCTTCAACGAGGGCTACTCGGCGACCGGCGGCGAGGACTGGATGCGCCCGGCGCTGTGCGAGGACGCCATGCGCCTCGGCCGGATGCTCGCCGAGCTGGTGCCGAAGGAGCCCGAGGCGCACGGGCTCATCGCGTTGATGGAGATCCAGGCGTCCCGCGCCAGAGCCAGAACGGCACGTGACGGTACACCTGTATTGCTCAACGACCAGGACCGCTCGCGCTGGGACCAGCTGCTGATCCGGCGCGGTCTCGCGGCGCTGGACCGGGCCGCGGCGCTCGGCCAGCCGATGGGGCCGTACGTGCTCCAGGCGGAGATCGCCGCGTGCCACGCGCGGGCGCGGACCCCGGAGGAGACCGACTGGCCGCGGATCGCGGCGCTCTACACGCGGCTCGTGCAGCTCGTGCCGTCGCCGGTGATCGAGCTGAACCGCGCGGTGGCGCTGTCGATGGCGTTCGGGCCGGCGGCGGGGCTGGAGATCGTCGACGGGCTCACCGAGATCCCGTCGATGAAGAACTACCACCTGCTGCCGAGCGTGCGGGGTGACCTGCTGGCCAGGCTGGGCCGGCCCGACGAGGCACGCGCCGAGTTCGAGCGTGCCGCGGCGCTGACCCGCAACGAGCGGGAACGCGAGCTGCTGCTGAAGCGGGCCGCCGAATGA
PROTEIN sequence
Length: 351
KRRAIDMFRRRETLDRKVTEIGRDLETQEPPTAEPDFDAIHSTISDDLLRLVFISCHPVLSTEARVALTLRLLGGLTTEEIARAFLTPEPTIAQRIVRAKKTLAQKKIPFEVPSGSELGERLASVLEVVYLVFNEGYSATGGEDWMRPALCEDAMRLGRMLAELVPKEPEAHGLIALMEIQASRARARTARDGTPVLLNDQDRSRWDQLLIRRGLAALDRAAALGQPMGPYVLQAEIAACHARARTPEETDWPRIAALYTRLVQLVPSPVIELNRAVALSMAFGPAAGLEIVDGLTEIPSMKNYHLLPSVRGDLLARLGRPDEARAEFERAAALTRNERERELLLKRAAE*