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H1-18-all-fractions_k255_4365659_4

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2341..2967)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037CB2FB similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 209.0
  • Bit_score: 362
  • Evalue 1.50e-97
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EWC58381.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 208.0
  • Bit_score: 370
  • Evalue 8.00e-100
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 190.0
  • Bit_score: 331
  • Evalue 1.40e-88

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
GTGACCACCGCTGCCAGCTCGGACGCCGACCTCATCGCGGCTCATGCCGCGGGGGACCCGCGGGCCTTCGCGGAGTTGGTCCGCCGGCACCGGGATCGGATGTGGGCGGTCGCCCTGCGCACCCTTCGCGACCCGGAGGAGGCGTCCGACGCGTTACAGGAGGCCTTCATCTCCGCCTTCCGCGCGGCCAGCTCGTTCCGCGCGGAGTCGCAGGTGACGACCTGGCTGCACCGGATCGTCGTGAACGCCTGCCTCGACCGGGTCCGCCGCCGCCTGGCCAGGCCGACCGTCCCGCTGCCGGAGACCGGCCCGGGGGAGCCGGCCGCGCCGCGTGACTCGATGTCGGAGCGGGAAACCAAGCTCGTGGTGCAGAAGGCGCTCAACCAGCTGTCGGAGGACCAGCGCGTGCCGATCGTGCTCGTCGACGTCGAGGGCTACTCGGTGGCCGAGACCGCCAAGATGCTCGGGATCGCGGAAGGCACCGTGAAGAGCCGGTGCGCGCGCGGCCGGGCGAAGCTGGCCAAAGTTCTGGGGCACCTGCGGAACCCCGATGCAGATGCGAACGTCCCAGATGGCGCAGTTGACAGGCGAGACGTGCCAGCACGGCGCCACGGGGAGGGACGATGA
PROTEIN sequence
Length: 209
VTTAASSDADLIAAHAAGDPRAFAELVRRHRDRMWAVALRTLRDPEEASDALQEAFISAFRAASSFRAESQVTTWLHRIVVNACLDRVRRRLARPTVPLPETGPGEPAAPRDSMSERETKLVVQKALNQLSEDQRVPIVLVDVEGYSVAETAKMLGIAEGTVKSRCARGRAKLAKVLGHLRNPDADANVPDGAVDRRDVPARRHGEGR*