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H1-18-all-fractions_k255_4434618_34

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(26906..27832)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigJ n=1 Tax=Streptomyces sp. AA4 RepID=D9V7N6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 302.0
  • Bit_score: 385
  • Evalue 4.30e-104
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EWC58872.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 307.0
  • Bit_score: 388
  • Evalue 7.20e-105
rpoE; RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 306.0
  • Bit_score: 379
  • Evalue 5.10e-103

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 927
GTGACAACCACCGACGAGGTCCTCGCCAAGGAGTTCTCGTCGCACCGGGGACACCTGATCGGCGTGGCGTACCGACTGACCAGCACGATCTCCGACGCCGAGGACGCGGTGCAGGAGGCGTGGCTGCGGCTGTCCGGGCTCGACGAGAGCCGGCGCGCGCAGATCCAGGACCTGCGCGGCTGGCTCACCACGGTCGTCGGCCGGATCTGCCTCGACCGCCTGCGCTCGGCCGCGGCGCGGCGGGAGCGGTACGTCGGGCCGTGGCTGCCGGAACCGGTCGTGACCCCGTTCGTCACCCCGCCGAGCGATGACCCGCTCGAGACGGTCGTGCGGGACGAGCAGGTGCGGCTGGCCGCGCTGGTGGTACTGGACAAGCTGACACCGGAGCAGCGGATCGCGTTCGTGCTGCACGACGCGTTCTCGGTGCCGTTCGGCGAGATCGCCGGCCTCCTCGGCGTGAGCGAGGCGACCGCGCGGCAGCACGCGTCCCGCGGCCGGCGCGCGGTGGCGGACGCGGAAGTGCCGGACCCCACCGACCTGGCCGAGCAGCGGGCGGTCGTGGAGAAGCTGGTGACCGCGCTCGCGAGCGGCGACCTGGACGGCGTGGTCGCGGCACTGCACCCGGACGCCGTGCTCATCGGCGACAGCGACGGCAAGGCCTCCACCGCCCGCCGGCACATCGTCGGTTCCGACAAGATCACCCGGTTCCTGGCGGGTCTGGCCAGGATGTACGGCGTGCACCGGCTCACCACCGGCGAACTGGTGCTGGTCAACGGCGATCTCGGGGTGATGTTCCCGGAGCTGCCCGCGGAGCCGGGCTTCCGCGCGCTCAGCCGGAGGGTCACGACGTTCGAGATGCGCGACGGGCGGATCCGGCGGATCTACGACATCGCCAATCCCGACAAGCTCACGCACGTCCGGCTCTGA
PROTEIN sequence
Length: 309
VTTTDEVLAKEFSSHRGHLIGVAYRLTSTISDAEDAVQEAWLRLSGLDESRRAQIQDLRGWLTTVVGRICLDRLRSAAARRERYVGPWLPEPVVTPFVTPPSDDPLETVVRDEQVRLAALVVLDKLTPEQRIAFVLHDAFSVPFGEIAGLLGVSEATARQHASRGRRAVADAEVPDPTDLAEQRAVVEKLVTALASGDLDGVVAALHPDAVLIGDSDGKASTARRHIVGSDKITRFLAGLARMYGVHRLTTGELVLVNGDLGVMFPELPAEPGFRALSRRVTTFEMRDGRIRRIYDIANPDKLTHVRL*