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H1-18-all-fractions_k255_4747710_9

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 6901..7758

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WH04_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 274.0
  • Bit_score: 349
  • Evalue 2.40e-93
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 274.0
  • Bit_score: 349
  • Evalue 6.90e-94
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACU36072.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 274.0
  • Bit_score: 349
  • Evalue 3.40e-93

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGAAACCCGAGCACGTGCAAGTGGCGGCGACACTGCGCCGTATGCGCGAGGAGGCGCGGGTCACGAGGGATGAGGCCGCTTTGGTCCTGGGCTGCACGAGGTCCAAGATCGGCGACCTGGAGACCGGCCGGTCCAAGCCCAAACCTGTCGAGTTGGAACGTTTGCTCGACCACTACGGCATTTCCGGCCCGGAGCGCGACGAGATGATCGAGTTCGCGCGGTCCTCGCGAGTCCGCCGCAGACCAAGCCCGTACACGACCGCCGTCATCCCGGCGACCGTCCGTCGCGCCGTCGATCTGGAGGCCCAGGCGATCTCGACGGTCTTCTTCTCACCCGAGCTGATTCCCGGACTGTTGCAGACACCGAACTACGCCAAGGCGTTGCTCGAGTGGTCGTGGGAGAACCAACCCGAGGACGTCGCCAAACGGTTGGAGCAGAGGATGGAGCGGTTCGCCGTGCTCACCCGGAGCCACCGCCCGCCGTTGCGTTACTGGTGCATCCTTGGCGAAGCCGCTCTGCGCACCAAGATCGGCGGCCCGAAGAGCATGCAGGAGCAGATCGAGCACCTCGTGCGGTTGAACCGCACACTCGGCAACCTGGTGATCCAGATACTGCCCCTCGGCTCCGGACCGCACGCGTTCCTCGGTGTCACGGTCACCATGCACCGCTTTCCGGCGCCGGCACCGGACATGATGATTCTGGAAGGGTATGGCTGGGAAGCCGTTCGCGACGAACCAACCCAGCTCGCCCAGGCAGCGCATCACCTCGATCTCGTCCGCGCCAAAGCACTCGGTCTCGAGGACAGCACCGAGTTCATGGAGCGAGTTCGGTACGAGATAATCGAAATGGATCCGTGA
PROTEIN sequence
Length: 286
MKPEHVQVAATLRRMREEARVTRDEAALVLGCTRSKIGDLETGRSKPKPVELERLLDHYGISGPERDEMIEFARSSRVRRRPSPYTTAVIPATVRRAVDLEAQAISTVFFSPELIPGLLQTPNYAKALLEWSWENQPEDVAKRLEQRMERFAVLTRSHRPPLRYWCILGEAALRTKIGGPKSMQEQIEHLVRLNRTLGNLVIQILPLGSGPHAFLGVTVTMHRFPAPAPDMMILEGYGWEAVRDEPTQLAQAAHHLDLVRAKALGLEDSTEFMERVRYEIIEMDP*