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H1-18-all-fractions_k255_4052614_11

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 8723..9238

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K134_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 210
  • Evalue 8.10e-52
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 210
  • Evalue 2.30e-52
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH31262.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 210
  • Evalue 1.10e-51

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Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGACCCGGTTCGACGGCGAGTTCGCCGAGTTCTACTCGGCCCGGTTCGAGGCGGTGCGGCGCACCGCGTTCGCGCTGTGCGGGGACTGGGTGGAGGCCGAGGAGATCGCGCAGGCCGGGTTCGTCCGGCTGTACGCCAAGTGGCCGCGGGTGGCCGGCGGCAACGCGGATGCCTACCTGCGCACGGTTGTCACGCGGCTGTTCCTCGACGCCAGACGGCGCGGACGGGCCAGGGAACGCCTGGTCGCCGAGCCGCCGGAACGGTCGGGGCCCGAGGACACGGCACAGGTCGACGACCGGCAGTCGCTGCTGGCCGCGCTGGTGCGGGTCTCTCCGCGGCAGCGGGCCACGCTGGTGCTGCGGATCGTGCACGACCTGTCCGTCGAGGAGGTCGCCAGAACGCTGGGCTGCTCGACGGGGACGGTCAAGAGCCAGCTGGCACGGGGCATGAACGCGTTGCGCGAGGCCTACCGCGGTGCCGAGCTATCCGAACGGAGCGTGCGAGATGTTGGATGA
PROTEIN sequence
Length: 172
VTRFDGEFAEFYSARFEAVRRTAFALCGDWVEAEEIAQAGFVRLYAKWPRVAGGNADAYLRTVVTRLFLDARRRGRARERLVAEPPERSGPEDTAQVDDRQSLLAALVRVSPRQRATLVLRIVHDLSVEEVARTLGCSTGTVKSQLARGMNALREAYRGAELSERSVRDVG*