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H1-18-all-fractions_k255_2731612_16

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(12095..12634)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036369F1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 179.0
  • Bit_score: 197
  • Evalue 9.70e-48
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 189
  • Evalue 7.50e-46
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW16020.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 189
  • Evalue 3.70e-45

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCTCGGGCAGACCTTCTCGACCGCGTGATCGCGTACCTGGCCGACGCGGGCGTGGGTGACCGCAGCCTGCGGCAGATCGCGGCCGGCGCGGGGACCAGCCACCGCATGCTGATCTACCACTTCGGCACGCGGGACGGCCTGCTCGTCGAGGTCGTGCGTGCGGTGGAGGAACGCCAGCGGGTCGCGCTCGCCGCGCTGCGGTCCCGCACGCCACGCGAGATGGCGCTCGAGTTCTGGCACCGGCTCGCCGACCCCGCGCTGGCCCCGTACGAGCGGCTGTTCTTCGAGCTGTACGGGGCGGCGCTGGGTGGTCAGGAGTCGGTGGCGCCGGTGCTCGAGGGGATCGTGACGTCGTGGCTGGCGGACGAGTCGATGTTCGCCGGCCTGCCACTGGCCCAGGCGCGGATGGCGCTCGCGTTCAGCCGCGGCGCGTTGCTGGACCTGCTGGCCACCGGCGACCGGGACGGCGTCGACGCGGCGGTGCGGGCGTTCATCGATCTGGTCTGGCCCGGTTCAGGACCACCAGAAGAGCCATAA
PROTEIN sequence
Length: 180
MSRADLLDRVIAYLADAGVGDRSLRQIAAGAGTSHRMLIYHFGTRDGLLVEVVRAVEERQRVALAALRSRTPREMALEFWHRLADPALAPYERLFFELYGAALGGQESVAPVLEGIVTSWLADESMFAGLPLAQARMALAFSRGALLDLLATGDRDGVDAAVRAFIDLVWPGSGPPEEP*