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H1-18-all-fractions_k255_3133994_9

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 7726..8586

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C4Y3_STRBB similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 287.0
  • Bit_score: 442
  • Evalue 2.10e-121
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 288.0
  • Bit_score: 451
  • Evalue 1.30e-124
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:AJT62368.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 288.0
  • Bit_score: 451
  • Evalue 6.40e-124

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Taxonomy

Streptomyces lydicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGACACCCGATCCATTCGTCGCCCACCGCAGCCTGCTGTTCACGGTCGCCTACGAAATGCTCGGCTCGGCGACCGACGCGGAGGACGTGCTGCAGGACTCCTGGCTGCGGTGGGCGGACGTCGATCGGTCCCAGGTGCACGATCCGCGCGCGTATCTCGTGCGGATCGTCACCCGGCAGGCACTCAACCGCCTGCGAACGCTGTCCCGCAGCCGCGAGGACTACGTCGGCGAGTGGCTGCCGGAACCGCTGCTGACGAGTCCTGACGTCGCGGAGGACGTCGAGCTCGCGGAAAGCGTCTCGATGGCGATGCTGACCGTGCTGGAAACGCTCGCGCCGGTGGAGCGGGCGGTGTTCGTGCTCCGTGAGGTCTTCGACATGCCGCACGGTGAAATCGCCGAGGCCGTGGGCAAGTCTCCGGCTTCGGTGCGCCAGATCGCGCGGCGGGCCCGCGGCCACATCATGGCCCGACGGCCCCGGATGCGGGTCAGCGCGTCGGAACAGCAGGCCGTGATGGATCGGTTCCTGGCCGCACTGGACACCGGTCGACTGCAGGACCTGATGGAGGTCATGGCACCGGACGTGGTCATGATCGCCGACGGTGGCGGGGTCGCGGCCGCCGCACTGACCCCCACGCACGGGGCGGAAGCGGTGGCGGCGGTGCTCGCCCGCGCGAGCCGGTCCGCGCTCGTGTCGACGGCCACATGGCTCAACGGTGCGGTTGCGGCTCGGATCGAAGTGGCCGGCGAGCCCGCCGCGGTGAGCGTCGCGGTGGCAGACGGTCGAATCACCCACATCTATCTGGTCCGGAACCCGCTGAAGCTGACGCGGCTGGACCAGCAGGCCAACCTCGCCAGGTAG
PROTEIN sequence
Length: 287
MTPDPFVAHRSLLFTVAYEMLGSATDAEDVLQDSWLRWADVDRSQVHDPRAYLVRIVTRQALNRLRTLSRSREDYVGEWLPEPLLTSPDVAEDVELAESVSMAMLTVLETLAPVERAVFVLREVFDMPHGEIAEAVGKSPASVRQIARRARGHIMARRPRMRVSASEQQAVMDRFLAALDTGRLQDLMEVMAPDVVMIADGGGVAAAALTPTHGAEAVAAVLARASRSALVSTATWLNGAVAARIEVAGEPAAVSVAVADGRITHIYLVRNPLKLTRLDQQANLAR*