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H1-18-all-fractions_k255_3264198_3

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1508..2551

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PK79_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 327.0
  • Bit_score: 450
  • Evalue 1.20e-123
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 328.0
  • Bit_score: 417
  • Evalue 3.30e-114
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 328.0
  • Bit_score: 417
  • Evalue 1.60e-113

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Taxonomy

Stackebrandtia nassauensis → Stackebrandtia → Glycomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGATCGAGGTGTCAGGTGACGGCGAGGACAGGGTGATGACGGAGCGGTCAGAGGAGTTCGTGCGGCAGACTGAGCCGTTGCGGCGGGAGTTGCTGGCGCACTGCTACCGCATGTTGGGCTCGGTGGATGAGGCCGCGGAGTTGGTGCAGGAGACGTACCTGCGGGCATGGCGGTCGTACGGCACGTTCGAGGGTCGCTCCTCGCTGCGTACCTGGCTCTACCGCATTGCCACCAACGCCTGTCTGTCCGCGTTGGAGCAGCGTGGCAGGCGGGTGTTGCCCTCTGGGCTGGGTGGTCCGGCCGAGGATCCTGATGCGCCGCCGGGGCCGGCGGCGTCCGAGGTGGCCTGGTTGGGGCCGGTTCCGGACGCTGCGGTGACCCACGAGATCCCCGAGACCGCCGACGCCCGCGACACCCGCGACCCTGCCGCGCTTTTCGCGGTGCGTGACAGTGTGCGGCTGGCGCTCGTCGCCGCCCTGCAGTACCTGCCGGGCCGGCAGCGAGCCGTCCTCCTGCTCCGGGAGGTGCTGGGTTTCAGCGCCGGCGAGGTCGCGGCCATGTTCGGGGTCTCCACCGCCTCGGTCAAGAGCGTGCTGCAACGAGCCCGTGCGCGGCTCGACGAGGTCGCGCCCTCGCCCGAGAGTGTCATCGAGCCGACCGAACCGCATGCCCGGGACCTGCTGCGCCAGTACATCGCCGGTTTCGAGAACGCCGACATGGCTGCCCTGGAGAAGGCGTTGCGCGCCGACGCGGCCATCGAGCTGGTGGGCACGCGGACCTGGTTCCGCGGCAGGGCGACGTGTCTGCGCTACCTGGCGCAGGTGATCGGGTCTCCTGGCGACTGGCTGATGACCCCGACCCGCGCCAACGGCCAACCTGCCGCGGCCACCTACTACCGCACCGCCGAGGGAACCCATCAGGCCCTCGGGGTCGCGGTTCTCAGTGTCACCCCCACCGGGATCACCCGCATCACCGTCTTCCCCGGAGGGCCCGGGCTCGTGGCGAGGTTCGGTCTTCCCTCCTCTCATCCGAGTCGGTCCTAG
PROTEIN sequence
Length: 348
MIEVSGDGEDRVMTERSEEFVRQTEPLRRELLAHCYRMLGSVDEAAELVQETYLRAWRSYGTFEGRSSLRTWLYRIATNACLSALEQRGRRVLPSGLGGPAEDPDAPPGPAASEVAWLGPVPDAAVTHEIPETADARDTRDPAALFAVRDSVRLALVAALQYLPGRQRAVLLLREVLGFSAGEVAAMFGVSTASVKSVLQRARARLDEVAPSPESVIEPTEPHARDLLRQYIAGFENADMAALEKALRADAAIELVGTRTWFRGRATCLRYLAQVIGSPGDWLMTPTRANGQPAAATYYRTAEGTHQALGVAVLSVTPTGITRITVFPGGPGLVARFGLPSSHPSRS*