ggKbase home page

H1-18-all-fractions_k255_3318921_6

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(5486..6070)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LFG3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 174.0
  • Bit_score: 167
  • Evalue 1.20e-38
sigma-70 region 4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 174.0
  • Bit_score: 167
  • Evalue 3.30e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 174.0
  • Bit_score: 167
  • Evalue 1.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinoplanes sp. N902-109 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGTCGGATTCAGGGGACGAGGTCACGGACTTAGCCGTCGCGGCTGGCCGCGGGGATCGGGACGCGGCCAACGCGTTGATCCGGGCCACGCAGCGTGATGTCTGGCGCTTCCTGCTCTACCTGGTCGGTCAGCCCGCCGCCGAGGAGCTGACCCAGGAGACGTTCGTCCGCGCGCTGAGAGGCGCGCACCGGTTCCGGGGCAGCGCCCGGACCTGGGTGCTCGGCATCGCGCGGCGGGTCGCCGCCGACCACCTCCGGACACGGTCGCGGAGCGTCTCCGACCAGGTCCGGCACCGGGCCGCCGAGCGGGCCGCCGAGCGGCAGCTGCCCGGGGCCGACGACACGGTCGCGATAACGCGGGCGGTGCGGACGCTGCCCGACGACCGGCGCGACGCGTTCGTGCTCACCCAGGTGCTCGGGCTCGGCTACGCGGCGGCCGCCGAGGTTTGCGACTGCCCGGTGGCGGCCATTCGCGCCCGGGTCGCGCGGGCGCGGCAGGAACTGGTTGCGGCGGTCGGCGTCGGAGAAATGCGTCCGGAAGGCCTAACGCGCGGTAGGAAATTCACCCGACCGCTACGGACATAG
PROTEIN sequence
Length: 195
MSDSGDEVTDLAVAAGRGDRDAANALIRATQRDVWRFLLYLVGQPAAEELTQETFVRALRGAHRFRGSARTWVLGIARRVAADHLRTRSRSVSDQVRHRAAERAAERQLPGADDTVAITRAVRTLPDDRRDAFVLTQVLGLGYAAAAEVCDCPVAAIRARVARARQELVAAVGVGEMRPEGLTRGRKFTRPLRT*