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H1-18-all-fractions_k255_5189407_17

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 13975..14475

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037E9470 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 166.0
  • Bit_score: 245
  • Evalue 2.20e-62
putative RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 165.0
  • Bit_score: 246
  • Evalue 3.70e-63
Putative RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHH14881.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 165.0
  • Bit_score: 246
  • Evalue 1.80e-62

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Taxonomy

Nocardia nova → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 501
GTGGCGCCGGATCCGGCGCTCGGGCTGCTGGAGCTGTACGACGAGGCGTTACCGCACGTCTACGGCTACCTGCTGGCGCGCTGCCGGGACGCGACCCTGGCCGAGGACCTCACCGCGGAGACGTTCCTCGCCGCCGTCACCGCCGCCCGCCGACCCGCACCACCACCACCCTCGGTCGGCTGGCTCATCGGCGTCGCCCGCCACAAGCTCGCCGACCACTGGCGCCGCCAGGCCCGCGAAGAACGCGGCCTGCGGCTGCTCGACGCAGACGCCGAGGCCGAGGACCCGTGGGACGACACCATCGACGCGATCCGCGCCCACACCGTGCTCGACACCCTCGGCCCCCACCACCGCGCCGCACTCACCCTGCGCTACCTCGACGGGCTGCCCGTGCCCGAGGTCGCCGACCACCTCGGCCGAACCGTCCACGCCACCGAGGCGCTGCTCGTACGCGCCCGCGCCGCGTTCCGCCGCTGCTACCGGGAGGAGGGCTCGTCGTGA
PROTEIN sequence
Length: 167
VAPDPALGLLELYDEALPHVYGYLLARCRDATLAEDLTAETFLAAVTAARRPAPPPPSVGWLIGVARHKLADHWRRQAREERGLRLLDADAEAEDPWDDTIDAIRAHTVLDTLGPHHRAALTLRYLDGLPVPEVADHLGRTVHATEALLVRARAAFRRCYREEGSS*