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H1-18-all-fractions_k255_5327434_4

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1860..2909

Top 3 Functional Annotations

Value Algorithm Source
MscS mechanosensitive ion channel n=3 Tax=Amycolatopsis mediterranei RepID=D8HWP9_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 416
  • Evalue 2.00e-113
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KDN20224.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 349.0
  • Bit_score: 421
  • Evalue 1.10e-114
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 340.0
  • Bit_score: 416
  • Evalue 5.60e-114

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
TTGTTCGTCCCGTGGCCGCTCATCGCGGTCGGGACCGGTGCGCTGTGCGTCTTCTTCGTCGCCGAGCACTTCGTCCGGCGCGCGCTTCGCAGGTTGAGCAAGCACACCGAGATCCTGGCCAACAACACCCATCACCCGTTCCGGTGGTTCTGTGCCACGGCCATCGTCGCGACCACCGTGGGGCGGGCGCTGTCCAGTGGCTGGCAGCACGTGATCACCCTGCTCCTCATCGGCACCGGGGCCTGGCTGTTCGCCGGCGTGCTGACCACCCTCGAACGCACGGCCATGAGCCGGCTGCGGGTCGGCGAACCGGACAACCTGCGGGCGAGGCGCGCGCAGACGCAGCTCGCCGTCGTCCACCGGTTCACGATCGTCATCATCGCGATCCTGGCGCTCGGCGCGATGCTCATGACGTTCCCCGCCGCGCGGGCCGCCGGCACCAGCCTGCTCGCCTCCGCGGGTGTCATCGGCGCCATCGCCGCCCTGGCGGCGCAGTCGCTGCTCGGCAACGTGTTCGCCGGCCTGCAGATGGCGTTCAGCGACGCCATCCGGCTCGACGACGTGGTCATCGTCGAGGAGGAGTGGGGCCGCATCGAGGAGATCACCCTCACCTACGTCGTCGTGCACCTCTGGGACGACCGGCGCCTGGTCATGCCCACCTCGTACTTCATGTCCAAGCCGTTCCAGAACTGGACCCGCACGGGCTCCTGGCTCCTCGGCACGGTCGAACTGGACGTCGACTGGTCGGTCGACGTGGACGCCATGCGGGCGGAGCTGGACAGCATCCTGCGGAGCACCGCACTGTGGGACGGCCGCTCGAACGTCCTGCAGGTGACCGACGCCACCAACACGCTCATCCGGGTCCGCGCGCTCGTCAGCGCGAAGGACGCCGGCACTCTGTGGGACCTGCGCTGCCTCGTGCGTGAACGGCTGGTGAACTGGATTCAGCAACACGAACCGGACAGCAGGCCTCGCATCAGGGTGGACAGCACTCGCAATGCGCTGTCGCCTCGCTCACCAGGGGAGGAAACGATTCAGCGAACCTCCTAG
PROTEIN sequence
Length: 350
LFVPWPLIAVGTGALCVFFVAEHFVRRALRRLSKHTEILANNTHHPFRWFCATAIVATTVGRALSSGWQHVITLLLIGTGAWLFAGVLTTLERTAMSRLRVGEPDNLRARRAQTQLAVVHRFTIVIIAILALGAMLMTFPAARAAGTSLLASAGVIGAIAALAAQSLLGNVFAGLQMAFSDAIRLDDVVIVEEEWGRIEEITLTYVVVHLWDDRRLVMPTSYFMSKPFQNWTRTGSWLLGTVELDVDWSVDVDAMRAELDSILRSTALWDGRSNVLQVTDATNTLIRVRALVSAKDAGTLWDLRCLVRERLVNWIQQHEPDSRPRIRVDSTRNALSPRSPGEETIQRTS*