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H1-18-all-fractions_k255_5327434_15

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(12925..14424)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000367E6DD similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 503.0
  • Bit_score: 754
  • Evalue 5.70e-215
Transcription accessory protein {ECO:0000313|EMBL:KDN20191.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 508.0
  • Bit_score: 750
  • Evalue 1.20e-213
transcriptional accessory protein similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 504.0
  • Bit_score: 746
  • Evalue 2.60e-213

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
CACCTCTCGGTCGACATCCGGGTGCGGCTGCGCGCCGCGGCCGAGGAGGGCGCCATCGGCGTCTTCGCGAACAACCTCCGCGACCTGCTCCTCGCCGCCCCCGCGGGCAGCCGCGCGACCATGGGCCTCGACCCCGGCCTGCGCACGGGTGTGAAGGTCGCGGTGGTCGACGCCACCGGCAAGGTCGTCGCCACCGACACGATCTACCCGCACGAGCCGCGCCGGCGCTGGGACGAGTCGCTGGCCACGCTCGCCAAGCTGGCCGCCGCGCACAAGGTCGAGCTGATCGCCATCGGCAACGGCACCGCGTCCCGGGAGACCGACAAGCTCGCCGCCGAGCTGCTGGCCAAGAGCCCGGAGCTGAAGCTCACCAAGGTGATGGTGTCCGAGGCCGGCGCCTCGGTGTACTCGGCGTCGGCGTACGCGTCGCAGGAGCTGCCGAACCTGGACGTCTCGCTGCGGGGCGCCGTGTCGATCGCGCGGCGCCTGCAGGACCCGCTGGCGGAGCTGGTCAAGATCGACCCGAAGTCCATCGGCGTCGGGCAGTACCAGCACGACATCTCCGAGTCCAAGCTGTCGCGGTCGCTGGACGCGGTGGTCGAGGACTGTGTGAACGGCGTCGGCGTGGACCTCAACACGGCCTCGGTGCCGCTGCTGACCCGTGTGTCGGGCATCGGCTCGTCGCTGGCGGCCAGCATCGTCGCCCACCGGGACGCCAACGGTCCGTTCCTCTCGCGCACCGCCCTGAAGAGCGTGCCGAAGCTGGGGCCGAAGGCGTTCGAGCAGTGCGCGGGCTTCCTGCGCATCCCGAACGGCGACGACCCGCTCGACGCGTCCAGCGTGCACCCGGAGGCCTACCCCGTGGTGCGGCGGATCGTGTCGACGACCGGGCTCGAGCTGACCGAGCTGATCGGCAACACGAAGACGCTGAAGTCGTTGCGGCCCGCGGAGTTCGTCGACGACACGTTCGGCCTGCCCACGGTGACCGACATCCTGGCCGAGCTGGACAAGCCGGGCCGCGACCCCCGACCGGCGTTCAAGACCGCGACCTTCAACGACGCCGTGCACACGCTCAACGACCTGAAGGTCGGCATGGTGCTGGAGGGCGTGGTCACGAATGTGGCGGCCTTCGGCGCGTTCATCGACATCGGTGTCCACTGCGATGGGCTCGCGCACGTCTCGCAGCTGTCGCGCAACTTCGTGAAGGACCCGCGCGAGGTGGTCAAGTCCGGCGACATCGTGCGTGCGAAGGTGCTCGAGGTCGACATCCCCCGCAAGCGGATCTCGCTGACGCTGCGGCTGGAGGAGGAGACCCGCGGCGGCGGCCAGCAGCAACGCGCCGGCGGCGCCGGTGGCGGCGGGGGCCAGCGCGGTGGCGGCGGAGGCGGCGGTCAACGTGGCGGCCAGCGCGGCGGTCAGCAGCAGCGGCGCGGCCAGCGGCAGGACTCCGGCGGCGCGATGGCCGAGGCGTTGCGGCGGGCGGGGTACCGGCCGAACTGA
PROTEIN sequence
Length: 500
HLSVDIRVRLRAAAEEGAIGVFANNLRDLLLAAPAGSRATMGLDPGLRTGVKVAVVDATGKVVATDTIYPHEPRRRWDESLATLAKLAAAHKVELIAIGNGTASRETDKLAAELLAKSPELKLTKVMVSEAGASVYSASAYASQELPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDISESKLSRSLDAVVEDCVNGVGVDLNTASVPLLTRVSGIGSSLAASIVAHRDANGPFLSRTALKSVPKLGPKAFEQCAGFLRIPNGDDPLDASSVHPEAYPVVRRIVSTTGLELTELIGNTKTLKSLRPAEFVDDTFGLPTVTDILAELDKPGRDPRPAFKTATFNDAVHTLNDLKVGMVLEGVVTNVAAFGAFIDIGVHCDGLAHVSQLSRNFVKDPREVVKSGDIVRAKVLEVDIPRKRISLTLRLEEETRGGGQQQRAGGAGGGGGQRGGGGGGGQRGGQRGGQQQRRGQRQDSGGAMAEALRRAGYRPN*