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H1-18-all-fractions_metab_conc_5

wsip-metawrap-drep-bins_Alphaproteobacteria_63_3
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 710 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H1-18-all-fractions_k255_1406919
Domain: Bacteria (66.67%)
3 2924 bp 61.83 2.46 100.86
H1-18-all-fractions_k255_5545322
Species: Oscillatoria nigro-viridis (50%)
2 2092 bp 65.06 1.36 100.38
H1-18-all-fractions_k255_3507797
Order: Rhodospirillales (66.67%)
3 2240 bp 66.25 1.74 100.18
H1-18-all-fractions_k255_5776466
Order: Rhizobiales (50%)
6 4900 bp 64.22 4.16 100.16
H1-18-all-fractions_k255_1055198
Phylum: Proteobacteria (50%)
4 3971 bp 63.56 1.74 99.87
H1-18-all-fractions_k255_5807183
Order: Rhodospirillales (75%)
4 3674 bp 64.78 2.20 99.86
H1-18-all-fractions_k255_2557221
Order: Burkholderiales (50%)
4 3596 bp 64.35 2.04 99.86
H1-18-all-fractions_k255_5703518
Order: Rhodospirillales (66.67%)
3 2179 bp 63.79 2.55 99.82
H1-18-all-fractions_k255_6825170
Species: Bradyrhizobium sp. ORS 375 (50%)
2 3710 bp 63.21 2.26 99.78
H1-18-all-fractions_k255_692980
Order: Rhodospirillales (80%)
5 3886 bp 61.63 2.08 99.67
H1-18-all-fractions_k255_4622107
Phylum: Proteobacteria (66.67%)
6 5644 bp 58.49 2.66 99.61
H1-18-all-fractions_k255_7768295
Order: Rhodospirillales (100%)
3 2440 bp 64.39 1.48 99.34
H1-18-all-fractions_k255_5084649
Domain: Bacteria (100%)
3 3017 bp 64.47 2.19 99.34
H1-18-all-fractions_k255_6305868
Genus: Bradyrhizobium (50%)
4 3405 bp 66.37 3.44 99.30
H1-18-all-fractions_k255_3127974
Class: Alphaproteobacteria (66.67%)
3 4252 bp 63.85 3.21 99.27
H1-18-all-fractions_k255_195741
Order: Rhodospirillales (50%)
12 12052 bp 61.94 2.55 99.10
H1-18-all-fractions_k255_6107077
Order: Rhodospirillales (100%)
4 2937 bp 64.32 1.89 99.08
H1-18-all-fractions_k255_7038692
Order: Rhodospirillales (66.67%)
3 2333 bp 66.82 3.09 98.89
H1-18-all-fractions_k255_6364195
Class: Alphaproteobacteria (60%)
5 6570 bp 61.60 2.08 98.86
H1-18-all-fractions_k255_4214508
Species: RLO_Rhodospirillales_67_15 (50%)
2 2231 bp 62.53 1.08 98.83
H1-18-all-fractions_k255_4265762
Class: Alphaproteobacteria (60%)
5 4762 bp 64.17 2.52 98.66
H1-18-all-fractions_k255_3683728
Species: Hyphomicrobium nitrativorans (50%)
2 4472 bp 65.14 2.92 98.48
H1-18-all-fractions_k255_761810
Order: Rhodospirillales (60%)
5 4516 bp 64.57 2.23 98.45
H1-18-all-fractions_k255_3122305
Order: Rhodospirillales (100%)
6 4512 bp 62.99 2.46 98.01
H1-18-all-fractions_k255_4298022
Genus: Skermanella (50%)
4 2681 bp 64.19 1.29 97.91
H1-18-all-fractions_k255_3551893
Species: Sorangium cellulosum (50%)
4 5696 bp 61.52 2.58 97.91
H1-18-all-fractions_k255_3470634
Species: Bradyrhizobium sp. CCGE-LA001 (66.67%)
3 2778 bp 62.99 1.57 97.84
H1-18-all-fractions_k255_588825
Order: Rhodospirillales (66.67%)
6 4220 bp 65.69 2.31 97.75
H1-18-all-fractions_k255_636715
Order: Rhodospirillales (66.67%)
3 2575 bp 66.72 3.15 97.63
H1-18-all-fractions_k255_1767615
Class: Gammaproteobacteria (50%)
4 3769 bp 62.67 2.31 97.43
H1-18-all-fractions_k255_3573655
Phylum: Proteobacteria (80%)
5 4651 bp 63.19 2.19 97.40
H1-18-all-fractions_k255_7266651
Order: Rhizobiales (100%)
4 3249 bp 64.45 2.68 97.32
H1-18-all-fractions_k255_1583520
Class: Deltaproteobacteria (50%)
4 3632 bp 64.81 2.31 97.30
H1-18-all-fractions_k255_3287026
Phylum: Proteobacteria (80%)
5 3148 bp 64.45 1.52 97.20
H1-18-all-fractions_k255_2523366
Class: Betaproteobacteria (50%)
6 6120 bp 62.19 2.16 97.11
H1-18-all-fractions_k255_1946349
Genus: Skermanella (60%)
5 3672 bp 61.71 1.10 97.06
H1-18-all-fractions_k255_5773622
Domain: Bacteria (100%)
5 3682 bp 59.97 2.65 97.04
H1-18-all-fractions_k255_3716374
Genus: Skermanella (50%)
4 6377 bp 60.73 2.75 97.00
H1-18-all-fractions_k255_4819981
Order: Rhodospirillales (76.92%)
13 9254 bp 64.13 2.40 97.00
H1-18-all-fractions_k255_7698778
Phylum: Proteobacteria (100%)
4 3256 bp 64.31 2.99 96.93
H1-18-all-fractions_k255_465798
Phylum: Proteobacteria (75%)
8 5529 bp 62.40 2.66 96.85
H1-18-all-fractions_k255_4616639
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (50%)
2 2297 bp 61.47 1.37 96.78
H1-18-all-fractions_k255_6832259
Order: Rhodospirillales (100%)
14 17223 bp 64.15 2.86 96.76
H1-18-all-fractions_k255_5515265
Class: Alphaproteobacteria (50%)
10 8437 bp 64.15 3.29 96.75
H1-18-all-fractions_k255_1987195
Species: alpha proteobacterium BAL199 (60%)
5 4233 bp 62.58 3.01 96.74
H1-18-all-fractions_k255_7379503
Order: Rhodospirillales (50%)
4 3266 bp 62.71 1.19 96.72
H1-18-all-fractions_k255_6959575
Order: Rhodospirillales (60%)
10 10009 bp 65.17 2.79 96.69
H1-18-all-fractions_k255_2802862
Order: Rhodospirillales (81.25%)
16 18320 bp 63.10 3.01 96.65
H1-18-all-fractions_k255_2256977
Species: R_Alphaproteobacteria_66_14 (60%)
5 5697 bp 61.89 2.05 96.63
H1-18-all-fractions_k255_4461289
Phylum: Proteobacteria (80%)
5 4462 bp 65.42 2.15 96.62
Displaying items 1-50 of 710 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.