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H1-18-all-fractions_k255_1854492

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Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_1854492_31
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17917..18135
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=9 Tax=Oxalobacteraceae RepID=IF1_HERAR
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
H1-18-all-fractions_k255_1854492_32
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18322..18687
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Massilia niastensis RepID=UPI000366FE3A
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
rpsM; 30S ribosomal protein S13
H1-18-all-fractions_k255_1854492_33
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18700..19104
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKQ4_9BURK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
ribosomal S11 family protein
H1-18-all-fractions_k255_1854492_34
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19306..19929
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Massilia niastensis RepID=UPI00036975CB
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
rpsD; ribosomal protein S4
H1-18-all-fractions_k255_1854492_35
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20039..21016
DNA (978bp) protein (326aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Burkholderiales RepID=L9PL78_9BURK
H1-18-all-fractions_k255_1854492_36
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21235..21630
DNA (396bp) protein (132aa)
50S ribosomal protein L17 n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKN5_9BURK
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
rplQ; 50S ribosomal protein L17
H1-18-all-fractions_k255_1854492_37
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21705..23072
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000366F061
Signal transduction histidine kinase {ECO:0000313|EMBL:EZP36792.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
histidine kinase
H1-18-all-fractions_k255_1854492_38
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23143..24957
DNA (1815bp) protein (605aa)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dsbD; cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC:1.8.1.8)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D3600
H1-18-all-fractions_k255_1854492_39
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(24981..25736)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000305A12D
putative proline-rich protein
Putative proline-rich protein {ECO:0000313|EMBL:AIY42544.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H1-18-all-fractions_k255_1854492_40
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25913..26395)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003745C89
Uncharacterized protein {ECO:0000313|EMBL:ELX12160.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
putative uncharacterized protein
H1-18-all-fractions_k255_1854492_41
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26607..27335
DNA (729bp) protein (243aa)
transcriptional regulator n=1 Tax=Massilia niastensis RepID=UPI000374DBAF
response regulator
Response regulator {ECO:0000313|EMBL:CDG85521.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H1-18-all-fractions_k255_1854492_42
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27332..28684
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003776AC2
HAMP domain protein
H1-18-all-fractions_k255_1854492_43
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28852..30048
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036CB17F
Multidrug resistance protein MdtA {ECO:0000313|EMBL:ELX12163.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
efflux transporter, RND family, MFP subunit
H1-18-all-fractions_k255_1854492_44
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30045..33206
DNA (3162bp) protein (1054aa)
multidrug transporter n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036FE385
Acriflavine resistance protein B {ECO:0000313|EMBL:KGF78867.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
acrB/AcrD/AcrF family protein
H1-18-all-fractions_k255_1854492_45
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33393..34289
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037A1003
Uncharacterized protein {ECO:0000313|EMBL:KGF78866.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
H1-18-all-fractions_k255_1854492_46
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34386..35411)
DNA (1026bp) protein (342aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Massilia niastensis RepID=UPI00036885B2
H1-18-all-fractions_k255_1854492_47
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35427..36143)
DNA (717bp) protein (239aa)
GTP-binding protein EngB n=1 Tax=Massilia niastensis RepID=UPI0003802053
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
GTPase of unknown function family protein
H1-18-all-fractions_k255_1854492_48
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36362..37072
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003724A50
Putative cytochrome c4 {ECO:0000313|EMBL:KFC73621.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
cytochrome c family protein
H1-18-all-fractions_k255_1854492_49
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37186..39297
DNA (2112bp) protein (704aa)
cytochrome C biogenesis protein ResB n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00035EDD91
Cytochrome C biogenesis protein ResB {ECO:0000313|EMBL:KHA80479.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
resB-like family protein
H1-18-all-fractions_k255_1854492_50
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39319..40482
DNA (1164bp) protein (388aa)
cytochrome C biogenesis protein n=1 Tax=Massilia niastensis RepID=UPI00037DF013
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGF78859.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ccsB; cytochrome c-type biogenesis protein CcsB
H1-18-all-fractions_k255_1854492_51
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40573..41553
DNA (981bp) protein (327aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
sulfoxide reductase catalytic subunit YedY n=1 Tax=Janthinobacterium lividum RepID=UPI0002897574
tat (twin-arginine translocation) pathway signal sequence domain protein
H1-18-all-fractions_k255_1854492_52
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41556..42212
DNA (657bp) protein (219aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKS4_9BURK
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
ferric reductase like transmembrane component family protein
H1-18-all-fractions_k255_1854492_53
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42258..43550)
DNA (1293bp) protein (431aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PLA0_9BURK
H1-18-all-fractions_k255_1854492_54
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43827..44015
DNA (189bp) protein (63aa)
Protein CyaY n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E490_9BURK
Protein CyaY {ECO:0000256|HAMAP-Rule:MF_00142, ECO:0000256|SAAS:SAAS00020372}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
cyaY; iron donor protein CyaY
H1-18-all-fractions_k255_1854492_55
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44199..46559)
DNA (2361bp) protein (787aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:ELX12184.1}; EC=2.4.2.- {ECO:0000313|EMBL:ELX12184.1};; EC=3.4.-.- {ECO:0000313|EMBL:ELX12184.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
mrcA; mrcA; penicillin-binding 1 (Peptidoglycan synthetase) transmembrane protein (EC:2.4.2.-)
Penicillin-binding protein 1A n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKS6_9BURK
H1-18-all-fractions_k255_1854492_56
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46951..48024
DNA (1074bp) protein (358aa)
Type IV pilus assembly protein PilM n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKJ8_9BURK
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:ELX12185.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
membrane protein ComM
H1-18-all-fractions_k255_1854492_57
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48024..48683
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F437B
Fimbrial assembly protein {ECO:0000313|EMBL:KGF78850.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fimbrial assembly family protein
H1-18-all-fractions_k255_1854492_58
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48693..49373
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003633D96
Pilus assembly protein PilO {ECO:0000313|EMBL:KGF78849.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pilus assembly , PilO family protein
H1-18-all-fractions_k255_1854492_59
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49370..49912
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003452853
Type IV pilus assembly protein PilP {ECO:0000313|EMBL:ELX12188.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
pilus assembly , PilP family protein
H1-18-all-fractions_k255_1854492_60
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49909..52110
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003761BD7
Type IV pilus secretin PilQ {ECO:0000313|EMBL:KFC73605.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
pilQ; type IV pilus secretin PilQ family protein
Displaying items 31-60 of 62 in total

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