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H1-18-all-fractions_k255_1757921_1

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(71..1318)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002FB8BDD similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 393.0
  • Bit_score: 515
  • Evalue 4.90e-143
Arabinose efflux transmembrane protein {ECO:0000313|EMBL:EOA06683.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 398.0
  • Bit_score: 513
  • Evalue 1.50e-142
araJ; arabinose efflux transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 388.0
  • Bit_score: 509
  • Evalue 7.60e-142

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGTCCAGCGCCTCTCTCCCCCACCCTGCCGCAGGCGCGCCCGCGGCATCCCTGTACCCGGCGTTTCTCTTCGCGCTGGGAACCTTTGCCATCGGCACCGAAGGCTTCATGATCGCGCCGCTGCTGCCGAAGATGGCCCACGATTTCGGCATGAGCGTGTCCGCGGTCGCGACGCTGGTGGTGGTATTTACCCTGTCCCTCTCGCTCAGTTCCCCCGTGACCACCGTGCTGAGCGCCCGCCTGAACCGCCGCGATACGCTGTTGCTGGCAATCGGCATCTTCACTGCCGCCAATCTGGCCGCCGCCGTGTCGACAGGTTTTGCAGGCCTGCTGGCGGCGCGCGTGCTGATGGCCGTCGCGGCCGGCCTCTACGTGCCGAATGCAAATGCGCTCGCCGGCGCGCTTGCCGGCCCGGAGCGGCGTGGCCGCGCCCTGGCGATCGTCAGCGGTGGCATGACCATCGCGATTGCGCTCGGGCTGCCGCTGGGCGCCCTGCTTGGTCATGCCTGGGGCTGGCGCGCGACCTTCCTGGCCGTGGCCGCGATGGGTGCGCTGGCGTTTTCTGCCGTCCTTATTGCGGTCCGGCGCCAGAGCGGCGGGGCGGCGGCAGTCGCCTCCATCGCCGAACGAATCGGGGTCGTGAAACAGGCGCAGGTGCTGCGCCTGCTCGCCATCACCCTGTTCTGGTCGATCGGCGCCTACACCTGCTATCCATTCATCGCACCCTATCTCAGCACCGTGCTGGGCTTCGGCGAGGCGGGCATCAGCGCAACCGTCACGCTGTGGGGCGCGTTTGCTGCGCTCGGCGTCGGCGCCGGCGGCATGCTCAATGACCGTCTCGGGGCAGGTCGCGTAGTGCGCGCCGCCCTGCTGTTGTTGATGCTGTCATTCTGCCTGCTGGCAGCCGCACCCCTTTTGACCACGACCCTGGCGCGTTGGCCGGTGTTGCTCGCGGTGGCCGTGTGGGGCTTCAGCGTGTGGGCATTTTTCCCTGCCCAGATGGCCAGGCTGGTGGGCGCCGGCGGCCCGGCGCAGGCCCCCGTTGCCCTCTCGCTCAACACCTCCACCATGTACCTTGGCTTCTCGCTAGGCAGTGCGCTTGGCGCCGGCATCTTGCACACCGGCGCTATATGGGGCATCGGACTGGCCGCCGGAATGGCCGAGGCCGCCGCCTTGTTGCTGGCCAAAAGGCAAGAAGCGCAATCCACCGTGGATAAAACGAACTTTACAGGCGCATTACATTCCTGA
PROTEIN sequence
Length: 416
MSSASLPHPAAGAPAASLYPAFLFALGTFAIGTEGFMIAPLLPKMAHDFGMSVSAVATLVVVFTLSLSLSSPVTTVLSARLNRRDTLLLAIGIFTAANLAAAVSTGFAGLLAARVLMAVAAGLYVPNANALAGALAGPERRGRALAIVSGGMTIAIALGLPLGALLGHAWGWRATFLAVAAMGALAFSAVLIAVRRQSGGAAAVASIAERIGVVKQAQVLRLLAITLFWSIGAYTCYPFIAPYLSTVLGFGEAGISATVTLWGAFAALGVGAGGMLNDRLGAGRVVRAALLLLMLSFCLLAAAPLLTTTLARWPVLLAVAVWGFSVWAFFPAQMARLVGAGGPAQAPVALSLNTSTMYLGFSLGSALGAGILHTGAIWGIGLAAGMAEAAALLLAKRQEAQSTVDKTNFTGALHS*