ggKbase home page

H1-18-all-fractions_k255_2502024_20

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(21165..21698)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DQS7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 175.0
  • Bit_score: 255
  • Evalue 3.00e-65
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 180.0
  • Bit_score: 256
  • Evalue 1.90e-65
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 178.0
  • Bit_score: 224
  • Evalue 1.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGTCTACGAGCGCGAGTGTGCCAGCCGACCTGGTTCAGGTGGGCTATGTATCGGGCGCCTACGGTGTCACCGGTTCGATCCGGGTCACGCCGTTTTCGACCGATGCCGACGCGCTGCTGAACGTCAAATCCTGGTGGCTGGATAAGCCGGCACTGCAGGCCGTCAATGTGCGGACTGCAAAGATTCACGGCGGCGACGTCGTGGCCCAGTTGGTGGGCGTGGTAGGGCGTGATCCCGCCGAAGCCTTGAAAGGCGCGGCCGTATCGATTCCCCGCAGCGAGTTTCCCCAACTGGCAGAAGATGAGTTCTACTGGTCCGACCTGATCGGCCTGGCTGTCGTGAACCTGCAGGGCGAAGCGCTCGGCACCGTGAGCGACATGATGGACAACGGCGCGCAGTCGATCTTGCGCATCACGCCGCTGCCTGCTGAGGGCGCGCCCGCAGAACGCCTGGTCCCGTATGTCGACCAGTACGTCAAGACGGTCGACCTGGCCGGCAAGACGATCACCCTTGACTGGGGTCTTGATTACTAA
PROTEIN sequence
Length: 178
VSTSASVPADLVQVGYVSGAYGVTGSIRVTPFSTDADALLNVKSWWLDKPALQAVNVRTAKIHGGDVVAQLVGVVGRDPAEALKGAAVSIPRSEFPQLAEDEFYWSDLIGLAVVNLQGEALGTVSDMMDNGAQSILRITPLPAEGAPAERLVPYVDQYVKTVDLAGKTITLDWGLDY*