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H1-18-all-fractions_k255_3332785_4

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(2454..3794)

Top 3 Functional Annotations

Value Algorithm Source
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 446.0
  • Bit_score: 724
  • Evalue 9.40e-207
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 446.0
  • Bit_score: 724
  • Evalue 4.70e-206
23S rRNA methyltransferase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034AEB75 similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 446.0
  • Bit_score: 733
  • Evalue 9.40e-209

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGCCAGATACCCAGATCGACATCAAATCCCTCGACATGGACGCCCGCGGCGTCGGCCACCTGGCCAATGAGGACGGCTCCCCCGGCAAGGTGATTTTTGTCGAAGGCGCCTTACCCGGCGAGCGGGTCAGCTTCCTGACCTTCAAGCGCAAGAAGAACTGGGAAGCGGCGCGCATGACGGAACTGCACAAGGCCTCCTCGATGCGAGTGGAGCCGCTGTGCCCCCATTTCGACTACTGCGGTGGCTGCTCGATGCAGCACCTGGAGCCATCGGCCCAGGTCGCCATGAAGCAGCGCGTGCTGGAAGATAATCTCTGGCACATCAGCAAGGTCAAATCGGAAAACATCATGCGCCCCATGCATGGCCCGACCTGGGGCTACCGCTACCGGGCGCGGCTGTCGGTGCGCCACGTGGCCAAGAAAAACACGGTGCTGGTCGGCTTCCATGAAAAGCGCTCCGCCTTCGTGGCCGACATCCAGACCTGCAAGATCCTGCCGGCCCACGTCGCCGCCATGCTGATGCCACTGCGGGAACTGATCGGCGCGCTGTCCATCTACGACCAGGTGCCGCAGATCGAAGTGGCGATCGGTGAAGGCCTCACGGTGCTGGTGCTGCGCATCATGGCGCCCTTGACGCGCGCTGATGAAACTTTATTGAAGGCCTTTGCCGACCAGTGGAACATCCAGTTCTGGCTGCAAACCAAGGGCCCCGAAACGGCCGCGCCGTTCTATCCAGAGGACAAGCCGCTGTACTACACCTTGCCTGAGTTCGGCGTGAACATGCCCTTCAAGCCCACCGACTTTACCCAGGTGAACCACCAGATCAACCGGGTGCTGGTCGCTTCGGCCCTGCGCCTGCTGGCAGCGCAGCCGGGCGACCGGGTCGCCGATCTGTTCTGTGGCCTGGGCAATTTCACCCTGCCGCTGGCGACCCAGGCGCGCGAAGTGGTCGGCATCGAGGGCAGCACGGCCCTGACCGAGCGGGCGCTGGAAAACGCGCGCGCCAATGGCCTGGAAGCAAAGACCCATTTCGAGACCCGCAATCTGTTTGATGTGACGACGGAAGATCTGGTGGCGCTGGGCAAATTCGACCGCATGCTGATCGACCCGCCCCGTGATGGCGCCCATGCGCTGGCGCAGGCTTTGGCTGGTTTGAAGGCGAGTCACCCGGAGCTGATGCCTACCCGCATCGTCTACGTCTCGTGCAGCCCCTCGACCCTGGCGCGTGACGCCGGTATCCTCACGCATGAGGCGGGGTATGTGTTGAAGAAGGCGGGGGTGGTGAATATGTTTCCGCATACATCGCACGTGGAGTCGATGGCGGTGTTTGAGTTGGCCTAA
PROTEIN sequence
Length: 447
MPDTQIDIKSLDMDARGVGHLANEDGSPGKVIFVEGALPGERVSFLTFKRKKNWEAARMTELHKASSMRVEPLCPHFDYCGGCSMQHLEPSAQVAMKQRVLEDNLWHISKVKSENIMRPMHGPTWGYRYRARLSVRHVAKKNTVLVGFHEKRSAFVADIQTCKILPAHVAAMLMPLRELIGALSIYDQVPQIEVAIGEGLTVLVLRIMAPLTRADETLLKAFADQWNIQFWLQTKGPETAAPFYPEDKPLYYTLPEFGVNMPFKPTDFTQVNHQINRVLVASALRLLAAQPGDRVADLFCGLGNFTLPLATQAREVVGIEGSTALTERALENARANGLEAKTHFETRNLFDVTTEDLVALGKFDRMLIDPPRDGAHALAQALAGLKASHPELMPTRIVYVSCSPSTLARDAGILTHEAGYVLKKAGVVNMFPHTSHVESMAVFELA*