ggKbase home page

H1-18-all-fractions_k255_3949770_5

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 3558..5255

Top 3 Functional Annotations

Value Algorithm Source
MSHA biogenesis protein MshE n=1 Tax=Janthinobacterium lividum RepID=UPI00028A3762 similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 567.0
  • Bit_score: 923
  • Evalue 8.10e-266
General secretion pathway protein E {ECO:0000313|EMBL:KFC65160.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 568.0
  • Bit_score: 936
  • Evalue 9.90e-270
type II/IV secretion system family protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 567.0
  • Bit_score: 912
  • Evalue 3.10e-263

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGGCGCGTCCCGAAAAAGTCCGGCTGGGGGAAATCCTGGTGCAACAAAAGCTGCTGTCCGAAGAGCAGCTCGGGCTTGCGCTGGCTGAACAGAAACGCAGCGGCCGCAAGCTGGGCCGGGTGTTCATCGAGAACGGCTTCGTCACCGAAGAGCAGATTTCCGGCGCGCTGGCCCGCCAGCTTGGCATTGCCTACATCAATCTGAAGTTTTATAACACCAACCCGGCCGTGGTGCGCCTGCTGCCGGAAACCCAGGCGCGGCGTTTTCGCGCCCTGCTGCTGGAAGACCGGCCTGACGCCATGCTGGTGGGGATGTCGGACCCGACCGACCTGTTTGCGTATGACGAGATCGCCCGCCTGCTCAAGAAAAACATCGAGCTGGCGGTGGTCAACGAGACTGAAGTGCTGCACGCGATCGACCGCATCTACCGCCGCACGGGCGAGATCACGGGCCTGGCGCGCGAGGTGGAGCAGGACCTGGGCGAGGCGGTCGACTTCGGCGCGCTGACGACCAATCCGGGCCTGGAAGAGGCGCCCATCGTCAAGCTTCTGCAGTCGGTGTTCGACGACGCCGCCCAGGTGCGCGCCTCCGACATCCACATCGAGCCGCAGGAATCGACCTTGCAGATCCGCTTTCGCATCGACGGCGTGCTGCACCTGCAGACCGAGGCCGACATCAAGGTCGCCACGCCGCTGGCGCTGCGCCTGAAACTGATGGCGGAACTGGACATCTCCGAAAAACGCCTGCCGCAGGACGGCCGCTTTGCGGTGAAGGCGCGCGGGCAGCGCATCGATGTGCGTATCTCCACCATGCCGACCCAGTACGGCGAATCGGTGGTGATGCGCCTGTTGAACCAGGGCGGCGCCACCCTGCGGCTGGACGCCATCGGCATGCCGGCCGAACTGGTCGAGCGCCTGCGCGCCATCGTGCGCCGTCCGAATGGCCTGGTGCTGGTCACCGGCCCCACCGGCAGCGGCAAGACCACGACCTTGTACAGCGCGCTGGCCGAACTGAACTCGGTGGAGAAAAAACTGATCACGGTGGAGGATCCGGTCGAATACCGTCTGGCCGGCATCAACCAGGTGCAGGTCAACGACAAGATCGAGCTGTCGTTCGCGCGCGTGCTGCGCTCGGCCCTGCGCCAGGATCCCGACATCGTGCTGGTGGGCGAAATGCGCGACCAGGAGACGGCGCAGATTGGCCTGCGCGCCGCGATGACGGGCCACCTGGTGCTCTCGACCCTGCACACCAACGACGCCGCCAGCACGCCGCTGCGCCTGATGGACATGGGCGTGCCCCGCTACATGGTGGGCAGCGCCCTGCAGGCCGTGCTGGCCCAGCGCCTGGTGCGGGTGATCTGCGAAAGCTGCGTCACCACCGCCGTGCCCAGCCCCACTGAAAAAGCCTGGCTGCGGCTTGAACTTGGTGAGCACGTGGCCGAGCACTACCACGCCGGCAAGGGCTGCTCGCACTGCAATGGCCAGGGTTACCGGGGCCGGACGGGCGTCTATGAACTGCTGGAGATGACGGCAGCCGTGGCCAGCGCCGCCAACCACGCCGACCCGGCCCACTTCCTGCAGGCGGCGCAGACCCAGATGGCGGGCGAAACGCTGCGCCGCCACGCGGTGGCACTCGTGGTGCAGGGCCGCACCACGGTGGCGGAAGCGATGCGCATCGCTAACCAGCTGGAGGACTGA
PROTEIN sequence
Length: 566
MARPEKVRLGEILVQQKLLSEEQLGLALAEQKRSGRKLGRVFIENGFVTEEQISGALARQLGIAYINLKFYNTNPAVVRLLPETQARRFRALLLEDRPDAMLVGMSDPTDLFAYDEIARLLKKNIELAVVNETEVLHAIDRIYRRTGEITGLAREVEQDLGEAVDFGALTTNPGLEEAPIVKLLQSVFDDAAQVRASDIHIEPQESTLQIRFRIDGVLHLQTEADIKVATPLALRLKLMAELDISEKRLPQDGRFAVKARGQRIDVRISTMPTQYGESVVMRLLNQGGATLRLDAIGMPAELVERLRAIVRRPNGLVLVTGPTGSGKTTTLYSALAELNSVEKKLITVEDPVEYRLAGINQVQVNDKIELSFARVLRSALRQDPDIVLVGEMRDQETAQIGLRAAMTGHLVLSTLHTNDAASTPLRLMDMGVPRYMVGSALQAVLAQRLVRVICESCVTTAVPSPTEKAWLRLELGEHVAEHYHAGKGCSHCNGQGYRGRTGVYELLEMTAAVASAANHADPAHFLQAAQTQMAGETLRRHAVALVVQGRTTVAEAMRIANQLED*