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H1-18-all-fractions_k255_6086554_22

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(22146..22715)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003763E43 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 182.0
  • Bit_score: 220
  • Evalue 8.60e-55
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KGF79542.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 181.0
  • Bit_score: 218
  • Evalue 7.90e-54
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 191.0
  • Bit_score: 136
  • Evalue 4.60e-30

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGAGCCCAGCCCCCGCCCCCACCGCCGACCACGACCTCCTGCGCCAGATGCAGGGGGGCGCCGCCGGCGCTTTCGAGGCGCTGTACCGGCGCCACCAGGGTCCCCTCTACCGTTTCTGCCTGATGCGCAGCGGCTCCGCCGAGATCGCGGCCGACGTGGTGCAGGAAGTATTCATGGGCCTGCTGACAGGCGCTTATAGATTCGATCTCCTGCGCGGCAGCCTGGCCAATTTTCTGTTCGGCGTGGCCCGTAATGTCGTGATGAAGCAGGACCGCCCGGCCGCCGCCGATGCCGGGGATGAAGAAGATGATGCGGTCTGCGAAGCTCCCACCCCGCTGCTGCGCCTGCTGCAAAACGAACAGGCCGAACAGGTGCGCCGCGCCGTCGCCGCCCTGCCGCCCCACTACCGCGATGTATTGATCCTGTTTGAACTGAACGAGCGATCCTACGTCGACATCGCCGCCATCTGCCAGCTCGACATCGGCACCGTCCGCTCGCGCCTGTCGCGCGCCCGCGGCGCCCTGGCCCGCCGCCTGGCCGCCTGGCGTGAACCGATCAATGTGGAATAA
PROTEIN sequence
Length: 190
MSPAPAPTADHDLLRQMQGGAAGAFEALYRRHQGPLYRFCLMRSGSAEIAADVVQEVFMGLLTGAYRFDLLRGSLANFLFGVARNVVMKQDRPAAADAGDEEDDAVCEAPTPLLRLLQNEQAEQVRRAVAALPPHYRDVLILFELNERSYVDIAAICQLDIGTVRSRLSRARGALARRLAAWREPINVE*