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H1-18-all-fractions_k255_7700079_17

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(20969..22372)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Pseudomonas sp. GM80 RepID=J2XSY4_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 404.0
  • Bit_score: 486
  • Evalue 2.70e-134
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJN34347.1}; Flags: Precursor;; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM80.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 404.0
  • Bit_score: 486
  • Evalue 3.80e-134
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 402.0
  • Bit_score: 463
  • Evalue 4.10e-128

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Taxonomy

Pseudomonas sp. GM80 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGACTTCGATTTCTCCTCCTCAAAAGCGGCCCCGGCTAGCCGCCAGCGCCATCGTACTTGCTGCCGCGGGCCTGGTGGCCGCCAGCCTGTCGGGCTGCCATAGCGCCGACAGCAAGGCTGCCGCGCCAAAGGCCGACGCCGGCGCGGTGGTATCGGTTGCTACCGTGCTCGAACGTAAAGTGACGGAAACCCAGGTGTTTTCAGGCCGCATCGAGGCGCTCGAGCGGGTCGTGGTGCGGCCCCGTGTGGGCGGCTACATCACGGCGGTCCACGTGCAGCCCGGCGCGCTGGTGCGCAAGGGTGATTTATTGTTTGTCATCGACCGCAGCCCGTATGAGGCCGAACTCAAGCGCGCGGAAGCGGCCGCCGCCGCCGCCACCGCCCGGGTCGAACTGGCCCGCCTCGAATTGACCCGTTCGGAGAAGCTGTTTGCCGACAAGGCCATTCCCCAGCGCGAACTGGACGCCAATGCTTCGTCCTTCAAGGAACTGGGCGCCAGCGCCCGCGCCGCCCAGGCCCAGTACGACAATGCCAGGTTGAACCTGAACTACACCCGCGTCATATCGCCCATCGACGGCCGGGTCGGCAAGGCCGAGATCACCCTGGGCAACCTGGTCGACCCGACCACGGTGCTCACCTCGGTCGTATCGGATCAGCGCATGTACGCCAGTTTCGACGGCGATGAGGCGACTTTCCTGCAGGTGGGCGCGGTGGCGCGCAAGGGCGGCCAGGTCAAGGTGCGCATTGGCCTGGCCAACGAGCAGGGCTTTCCCCACCAGGGCAAGCTTGAATTTGTCGACAACCAGCTCGACGCCCAGACCGGCGCCGTGCGCATGCGCGCGCTGTTCGACAATACCGACAAGGCGCTCGCGCCTGGCCTGTTTGCGCGGGTCCAGGTGGAGGGCGCCAGCAATAGCGACGCCGGCACGGGCAAGACGCTCGCGCCGTCCGGCCAGGCGGTGCTGATCAACGACCGCGCCGTCGGCACCGACCAGAACCGCAAGTTCGTCTATGTGGTCGGCCCCAAACAGGAAGCCGTTTATCGCAACGTCACCCTGGGCCCCGTCATCGATGGCCTGCGCGTGGTGCGCGGCGGCCTGACGGCGGGCGAAACCATCGTCGTTAACGGCTTGCAGCGGGTCCATCCGGGCGGTGCGCTGGCGCCGCACGTGGTGGCGATGGATTTTGATCCGGGCGCTGAGCTTGCGGAAGTCAAGGGCGCTGCTGCATCTGCCGGTGCCGCTGCCGCTTCGGCCGGTACTGCGGCCGGCACTGCGGCAAGCGCGCAAAAGTCGGCTGCTGCGCCGGGCGAAGTTCCAGCGGGCAAGTCGCCCAGCGCGGCCAAGTCCGCCGAAGCGGCCACTGCTGCAGCCCTTGCCGCAGCGTCCCCGGCCAAAGGATAA
PROTEIN sequence
Length: 468
MTSISPPQKRPRLAASAIVLAAAGLVAASLSGCHSADSKAAAPKADAGAVVSVATVLERKVTETQVFSGRIEALERVVVRPRVGGYITAVHVQPGALVRKGDLLFVIDRSPYEAELKRAEAAAAAATARVELARLELTRSEKLFADKAIPQRELDANASSFKELGASARAAQAQYDNARLNLNYTRVISPIDGRVGKAEITLGNLVDPTTVLTSVVSDQRMYASFDGDEATFLQVGAVARKGGQVKVRIGLANEQGFPHQGKLEFVDNQLDAQTGAVRMRALFDNTDKALAPGLFARVQVEGASNSDAGTGKTLAPSGQAVLINDRAVGTDQNRKFVYVVGPKQEAVYRNVTLGPVIDGLRVVRGGLTAGETIVVNGLQRVHPGGALAPHVVAMDFDPGAELAEVKGAAASAGAAAASAGTAAGTAASAQKSAAAPGEVPAGKSPSAAKSAEAATAAALAAASPAKG*