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H1-18-all-fractions_k255_7708224_1

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 2..904

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00035D8E30 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 297.0
  • Bit_score: 554
  • Evalue 4.00e-155
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 297.0
  • Bit_score: 554
  • Evalue 1.50e-155
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963, ECO:0000313|EMBL:CDG82061.1}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 297.0
  • Bit_score: 554
  • Evalue 7.30e-155

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
TGGGTCGAAGCGGAAGTGGCCGCCGGTTATCCTTACAGCGCCGTGCTGGGCCGTAACGTGCCTGCCATCCAGGAACACCAGAAGCGCATGATCGCCCTGCAAGCCCGGGTGGCCCTGCCGCTGGCCGACCTGCGCAAGATCAACAAGCAGATGGCCGCCGGTGAAAAGCGCGCCCGTCACGCCAAGCGCGAAATGACGGTTGCCAACCTGCGCCTGGTGATTTCGATCGCCAAGAAGTACATCAACCGGGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAATATCGGCCTGCTGAAAGCCGTCGACAAGTTCGAATACCGCCGCGGTTACAAGTTTTCGACCTACGCCACCTGGTGGATCCGCCAGGCCATCACCCGCTCGATCGCGGACATGGCCCGCACCATCCGCGTGCCGGTGCACATGATCGAGACGATCAACAAGATGAACCGCATCTCGCGCCAGATCATGCAGGAAACGGGCAGCGAGCCGGATCTTGCCACCCTGGCGATCAAGATGGAAATGCCGGAAAACAAAGTCCGCGAGATCATGAAGATCGCGAAGGAGCCCATCTCCATGGAAACCCCGATGGGCGAAGATGGCGATTCGCAACTGGGCGACTTCATCGAGGACAACGCGACTTTGGCCCCGCTGGACGCGGCCCTGCACGCCTCGATGCGCAACGTCATCAAGGAAGTGCTGGACTCGCTGACCCCGCGCGAAGCAAAAGTGCTGCGCATGCGCTACGGCGTCGAAATGTCGAACGACCACACGCTGGAAGAAGTCGGCAAGCAGTTCGACGTCACCCGCGAGCGGATTCGCCAGATCGAAGCGAAGGCGATGAGCAAGCTGCGCCAGCCGTCGCGCTCGGACAAGTTAAAGAGCTTCCTGCATAACCAGTAA
PROTEIN sequence
Length: 301
WVEAEVAAGYPYSAVLGRNVPAIQEHQKRMIALQARVALPLADLRKINKQMAAGEKRARHAKREMTVANLRLVISIAKKYINRGLQFLDLIQEGNIGLLKAVDKFEYRRGYKFSTYATWWIRQAITRSIADMARTIRVPVHMIETINKMNRISRQIMQETGSEPDLATLAIKMEMPENKVREIMKIAKEPISMETPMGEDGDSQLGDFIEDNATLAPLDAALHASMRNVIKEVLDSLTPREAKVLRMRYGVEMSNDHTLEEVGKQFDVTRERIRQIEAKAMSKLRQPSRSDKLKSFLHNQ*