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H1-18-all-fractions_k255_4433941_8

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(7667..8230)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2Y6E0_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 183.0
  • Bit_score: 206
  • Evalue 1.70e-50
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJL02726.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 183.0
  • Bit_score: 206
  • Evalue 2.30e-50
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 203
  • Evalue 3.10e-50

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCAAGTGACAAAAAACAGGAAGTCATGATGGCCGCCAGGCTGATGGTCCAGGCCCAGGGCTACAACGCGCTCAGTTTCCGCGACCTGGCCCAGGCAGTGGGGGTAAAAAGCTCCAGCATCCACTACTACTTCCCGACCAAGGGCGATCTGGGTGTGGCGCTGGCGCGCCAGTACACGGAAGAGTTTTTGACTTACCTGAACGGTCTGCCTGAACAGGGGATGGACTGGCGCGCCTGCATCGCCGCCTACGCCGAGGTATTTCGCAACACGCTGCTGCGCGAAAACCGCATGTGCATGGCGGGCGTGCTGGCGGCCGAACGGCCTGGCCTGGCGCCGGAAGTACAGGTGGAAGTCGAACGGTTTACCGAACAGATCGTGGACTGGCTCGCCGCGACGCTCGCGCGCGGCCATCCCGAACTCGATGCCGCCGACCTGCGCACGCGCGCCTACGGGGTGTTTTCGGCCATCGAGGGCGCCCAGCTGGTGGCGCGCGGCTCGGACGATGTCGCCCTGTTCGACCGCACCCTGGCGGCCTACCGCAGCACGGGGCTGCTGCCCTAG
PROTEIN sequence
Length: 188
MASDKKQEVMMAARLMVQAQGYNALSFRDLAQAVGVKSSSIHYYFPTKGDLGVALARQYTEEFLTYLNGLPEQGMDWRACIAAYAEVFRNTLLRENRMCMAGVLAAERPGLAPEVQVEVERFTEQIVDWLAATLARGHPELDAADLRTRAYGVFSAIEGAQLVARGSDDVALFDRTLAAYRSTGLLP*