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H1-18-all-fractions_k255_4433941_20

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 18691..20247

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Pseudomonas sp. GM80 RepID=J3IS02_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 518.0
  • Bit_score: 639
  • Evalue 1.60e-180
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJN34373.1}; Flags: Precursor;; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM80.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 518.0
  • Bit_score: 639
  • Evalue 2.30e-180
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 508.0
  • Bit_score: 520
  • Evalue 3.10e-145

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Taxonomy

Pseudomonas sp. GM80 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
GTGTCTGCCGCGTCGCCCGTGGCCACGAGCTCCCGGCTGCAATTGCTGGTGATCTCCTTCATTTCATCGCTCGTGATGCTGGACTCGAACGTGGTCGCGGTCGCGCTGCCAACGATTGCACGCTCGCTCAATGCCGATTTCGCCGATGTGCAGTGGGTGATCACCGCCTACGTGCTGCCGTTCGCCGCCTTGTTGCTGGCCGCCGGCTCGCTCGGCGACCGGGTGGGCCGCCGCCTGGCGGCGCTGATCGGCCTGGTCCTGTTCGGCCTGTCCTCGCTCGCCTGCGGCCTGGCGGCCACGCCGACCGTGCTCAATATCGCGCGTGCAGTGCAGGGCGTTGGCGCAAGCCTGGTGCTGACCGCTTCGCTGGCGCTGATCAACCACAATTTTGCCGGCGCCGCGCGGGCCCGCGCCTTTGCCTTCTGGGGCGCCAGCCTGGGCATTGCAATCACGTCCGGCCCCATTATTGGCGGCATCATCGCCAGCAGCGTCGGCTGGCCATGGGCTTTCCTGATCAATGTGCCGATCTGCACGGTCCTGTTCATCGTGGCGGTCCGCATCATTCCCGAATCGCGCGATCCGGACGCGACGAGCCTGGACTATGCCGGCATCCTCACCTTCAGCGCCGGCCTGTTTTCAGTGACCTGGGCAGTCATCGACGGCAACGCACTGGGCTGGCTGTCCGCGCCCATCCTGCAGCGCGCGCTGGGCGGCATCGTGCTGCTGGGCCTGTTCGCGGTGGTCGAACTGCGCCAGCAGCGGCCCATGCTCGACTTCGGCATCTTCGGCTCGACCCACTTCATCGGCACCGTGTTTGCCATGCTCGGTTATGCAGGCGGCGCGCAGGTGATGATTTTTTACCTGCCACTGTATCTGCAAAACGTGTTCGGCTTTTCGCCGCTGGCAGCGGGCATCGCCATGCTGCCGTTCGCCCTGCCCATGTTCGTCGTGCCGCGCCTGTCCACTCGACTGGGCTGGGCCGCCCATCGCCTGCTGTGCGGCGGGCTGCTGATCACCGCCGGCGCCAACCTGGCCATGGCGTGGTGCTCTGCCAGCGGCGCGTCCTATCCCTGGTTTGCCATGGCGATGGGGGTGGCCGGGACCGGCGCCGGTGTGCTCAACGGCGAGACCGCCAAGGCGCTGCAGGGGGCGCTGCCGGCTAATCGTTCCGGCGTCGGCTCCGGCATCGGCGCGACGATTCGCTTTGTCGGCCTGCTGTTCGCCGTGGCCGGCCTGGGCGCGCTGCTGGTGGGCGCCACCACCCGCAAATTCATCGCTGTGGCAGGGCCTGCGGGAATGCCGGCCGATGCCGCCGCCGGCCTGGCGCGTCGCTTTGCCGCCGGCGACCTGGCCGGCGCTGCCGCTGGCCTGCCGGCGGGGCTGCGCGCCAGCCTCGGACCGGCCTTGCACCATGCCTTCGAAGCGGGTTTTGCCAGCGCCGCAGGCGCTTCGGCTTGCACGGCAATCATCTGCCTGGCGATGAGCTATTTGCTGGTCGACCGGCGCGTGTCCGACAGCGCCGCCGCGCATGCCGAAGCAGTTTTCGTGGCTGACTAG
PROTEIN sequence
Length: 519
VSAASPVATSSRLQLLVISFISSLVMLDSNVVAVALPTIARSLNADFADVQWVITAYVLPFAALLLAAGSLGDRVGRRLAALIGLVLFGLSSLACGLAATPTVLNIARAVQGVGASLVLTASLALINHNFAGAARARAFAFWGASLGIAITSGPIIGGIIASSVGWPWAFLINVPICTVLFIVAVRIIPESRDPDATSLDYAGILTFSAGLFSVTWAVIDGNALGWLSAPILQRALGGIVLLGLFAVVELRQQRPMLDFGIFGSTHFIGTVFAMLGYAGGAQVMIFYLPLYLQNVFGFSPLAAGIAMLPFALPMFVVPRLSTRLGWAAHRLLCGGLLITAGANLAMAWCSASGASYPWFAMAMGVAGTGAGVLNGETAKALQGALPANRSGVGSGIGATIRFVGLLFAVAGLGALLVGATTRKFIAVAGPAGMPADAAAGLARRFAAGDLAGAAAGLPAGLRASLGPALHHAFEAGFASAAGASACTAIICLAMSYLLVDRRVSDSAAAHAEAVFVAD*