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H1-18-all-fractions_k255_4639455_3

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 800..1399

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PBT4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 193.0
  • Bit_score: 201
  • Evalue 4.40e-49
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ELX09090.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 193.0
  • Bit_score: 201
  • Evalue 6.10e-49
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 190.0
  • Bit_score: 199
  • Evalue 8.00e-49

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Taxonomy

Janthinobacterium sp. HH01 → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCATGCACGGGACGCAAGGGAGGACGCAGGCGGCAACAGGCGGGACGACCGCGACACCGGGGACCGGCAACTGCTGGCCCAGGTGGCGGCCGGGCGGCGCCCTGCGTTTGAAACGCTCTACCGCAGCTATTTTCCCCGCCTGGAAAGGTTTTTGGGCAGCCTGACGCGCGACCGCAGCCTGGTCGAGGAGGTCATCAACGATGCCATGCACGTGGTCTGGCGCAAGGCGGACAGTTTTGACGCCAGCTGCAAGGTCTCAACCTGGATTTTTGCCATTGCATTCAGGACAGCCAAAAAAGCGTTTCGGGGCGTCGATCCACCGGAGGAGGCCGATTTCGAGGCGCTCGAGGATGATGGGACAGGGGCGCCGGAGCGGCTGTTTGCCCTGCACGAGATGCGCGACACGGTCGGCGCGGCCCTGGCGCTGCTGCCGGCCGTGCAGCGCGCCGTGGTCTGCCTCACGTACCAGCATCATCTCGATTACAGCGACATCGCGGCCATCCTGGATTGCCCCGTCAATACAGTAAAAACCCGGATGTTCCACGCGCGCCGGCGCTTGCGGGTGCTGCTGGCCGACTTGAAGGAAACTGAGCGATGA
PROTEIN sequence
Length: 200
MHARDAREDAGGNRRDDRDTGDRQLLAQVAAGRRPAFETLYRSYFPRLERFLGSLTRDRSLVEEVINDAMHVVWRKADSFDASCKVSTWIFAIAFRTAKKAFRGVDPPEEADFEALEDDGTGAPERLFALHEMRDTVGAALALLPAVQRAVVCLTYQHHLDYSDIAAILDCPVNTVKTRMFHARRRLRVLLADLKETER*