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H1-18-all-fractions_k255_4834663_2

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(333..1985)

Top 3 Functional Annotations

Value Algorithm Source
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC domain n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E5D0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 550.0
  • Bit_score: 594
  • Evalue 6.40e-167
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|SAAS:SAAS00035571}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 550.0
  • Bit_score: 594
  • Evalue 9.00e-167
mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 568.0
  • Bit_score: 485
  • Evalue 1.20e-134

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Taxonomy

Massilia timonae → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGGACTGCCGGGCGCACTGGCGCGGGCGCGAACGCTTTACGATCTACGCTGCCGGGTTTGACGCGAACGCGCTCGCGCAGTGGCATGCGCAGTGCGTGGCGGAGTGGCGCGCCGACCCGGAACGGCCGCGCCACCTGCACCTGATCGCCAGCGCCGACAGCCCGCTGCCCGGCTTCGAGCGCCAGTTGCAAAGCGATGCGGCCATCACCTTCGATCGGCTGTACGTCCCGCCACAAGCGGCGCTGTCGCAACTGCGCGCGCGCATCGATGGCGTCTGCATCGCCCCTGGCTGCACGGTCGACACCCGCTTTGCCACCAGCCTCGCGCGCCTGCTTGCCCGTGACGCCGTGCTGGACGCGCCGTCGCTCGACGCGCAGTCGGTGGACGCCCTGCGCGCCACCGGCTGGGTGTTTGAAGAACCTGACGCGGCCCGCTTCGCCACCCGCAAACCCATCTCTCCCGCGCCGCCCGCGCCCGCACGCAGCGCCATCGTCATCGGCGCGGGCCTGGCTGGCGCTGCGGCCTGCGAGCGCCTGTGCGCGCGGGGCTGGCAGGTGACGCTGGTCGAACGCCACCCCGCCGCGGCGATGGAAGCGTCGGGCAACCTGGCCGGCATCACCATGCCCCTGCTGTCGAAAGACGATAACCAGGCCTCGCGTTTATCGCGCGCGGCCTTCCTGTTTGCCCGCGCCTACTGGGCGCAACTGGGCGGCGTGGGCGAGAACATCGAGGGCGCCAACTGCGGCGTGGTGCTGGCCGCGCGCGACGCCGCCCACGCGCTGCTGCAGCGTTCCATCGCGGCGGCGCAGGCCATGCCGACGGGGTACGCGCAATGGTTTGAGCCAGACGCGGCGCGCGCGCGCTTCGGCGCCGTCGCCCCGCACGGCGCCTGGTGGTTTGAACAGGGCAGCTGGATCCGCCCCGGCAGCGCCATCGACGCCATGCTGGCGGCCTGCGGTGAGCGCTTGACGACCCGTTTTGGCGTGGGCGAGGTTAGCCTCGAGCGCAGCGGGGACCAATGGCAAGTGCGCGGCGCCGATGGAGAAGTCATCGCACGTGCGCCCACCGTCATCGTCGCCAGCGGCGGCGGCGCCGTGGCGCAGACGGCGTCGCTGCCGCTCGATCGCGTGCGCGGCCAGGTCACCCATCTGGCCAGCGAGGCCGCGCCCGAACTCGCATTTGTCCTGTGCCGCGAAGCCTACCTGACGCCACCGGCGGGTGGACTGCACAGCATGGGCGCCACCTACGACATCGATGACGATCCCGCCGTGCGTCAATCGAGCCAGGATGAAAATCTGAGCAATTTACGCTCCATGCTGGACAATGACACGCTGGCGAACAATGCGCCGCTGGCAGGCCGGGTTGGTTTTCGGGCCGTGGCGCCCGACCGCCTGCCGATGGTGGGCGCCGTGCCCGACCCAGGTTTTGACCTGGGCGCCGAGAGGCTGCGCGAACTGCCGCGCCAGAGCGGCCTGTTTGCCCTGCTGGGCTATGCCTCGCGGGGGCTGACCTGGGCGCCGCTGGCCGCCGAACTGCTGGCAGCCAGCCTGGAGGGCGAACCGCTGCCGCTGCCCGGCGAGCTGGTGGACGCGCTGGACCCGGGCCGCTTCCTGTTGCGCGAGCGCCGCACCAGCCGTCAGCGTCGTTCGTAA
PROTEIN sequence
Length: 551
MDCRAHWRGRERFTIYAAGFDANALAQWHAQCVAEWRADPERPRHLHLIASADSPLPGFERQLQSDAAITFDRLYVPPQAALSQLRARIDGVCIAPGCTVDTRFATSLARLLARDAVLDAPSLDAQSVDALRATGWVFEEPDAARFATRKPISPAPPAPARSAIVIGAGLAGAAACERLCARGWQVTLVERHPAAAMEASGNLAGITMPLLSKDDNQASRLSRAAFLFARAYWAQLGGVGENIEGANCGVVLAARDAAHALLQRSIAAAQAMPTGYAQWFEPDAARARFGAVAPHGAWWFEQGSWIRPGSAIDAMLAACGERLTTRFGVGEVSLERSGDQWQVRGADGEVIARAPTVIVASGGGAVAQTASLPLDRVRGQVTHLASEAAPELAFVLCREAYLTPPAGGLHSMGATYDIDDDPAVRQSSQDENLSNLRSMLDNDTLANNAPLAGRVGFRAVAPDRLPMVGAVPDPGFDLGAERLRELPRQSGLFALLGYASRGLTWAPLAAELLAASLEGEPLPLPGELVDALDPGRFLLRERRTSRQRRS*