ggKbase home page

H1-18-all-fractions_k255_4988435_4

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 5074..7761

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035C42DD similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 876.0
  • Bit_score: 889
  • Evalue 2.70e-255
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16302.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 777.0
  • Bit_score: 328
  • Evalue 2.60e-86
PAS/PAC sensor-containing diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 767.0
  • Bit_score: 310
  • Evalue 8.50e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2688
ATGGACAAGCTGCCACTTTCAGAATACGACCGGACCGTCGCGCTCGCTGCGCTGGGCGTGCTCGATACCCCCTCCGAAGCCCGCTTCGACCAGTTCACCCATCTCGCCCGCGCCGCGTTCGGCGTGCCGATCGCGCTGATTTCCCTGGTCGACGAAAAGCGCCAGTGGTTCAAGTCGCGCAGCGGCCTGGACGCCACCGAGACACCCCGTTCGGCCGCCTTCTGTAGCCACGCCATCGAAGGCGCCGATACCATGATCGTGCCGGACGCCTTGCTCGATCCCCGCTTCGCCGATAATCCCTTGGTGCTGGGCGCGCCGCATATCCGTTTTTATGCGGGCCATCCGGTGCGCGCCCGCAGCGGCCATGCGCTGGGCACCCTGTGCATCATCGATACCGTGCCGCGCGAACTGTCGGCCGACCAGCAGACCATGCTGCGCTCGCTCGCCGGCCTGGTCGAAGCGGAACTGAACCGGGACAGCCTGGAGCGGGTGCGCCAGTTCGCCGAAGCGGCCTTGCATGAACTGAATGCCTCGCTGGAAGCGCGGGTGCGCGAACGCACCCTCGCGCTGGAAGAAAAAAACGAAGCGCTCAACCGCGAGGTGCGCCAGCGCGCCGATGTTGAGGCCAGCCTGCGCCGCAGCGAAGCGCGGGTGCGCACCATGATCGAGGCCTCGTTCTCGGCCTTTGTCGCCACCGATGAGCACTCCTGCATCATCGAATGGAACAAGTCGGCCGAGCGGGTGTTCGGCTGGACCCGCGCCGAGGTGCTGGGACGGTCATGGATGAGCGTTATCAACAGCGCCACCGCCGTGTTCGCGCCCGGCCACGCCGCCGCCGGCACCGCCGATGCCGCCGCAAGTCGCATCGTCCGCCTGCAGGCCAGCACCCGCTCGGGCGCGCTGATCACGGTGGAAATGGTGGCCGACAGCTACCTGATCGACGACCAGATGGTGTTCGGCGCCTTTATCAATGATGTCAGCGACCAGACGGTAACGGCCCGGGCGCTGGAACAAAAACAGGAGTTGCTCGACGCCGTGCTGGAAACCGTCGACGTGGCCGTGGTCGCCTGCGACGCTGCCGGGAACCTGAGCTTCTTCAACCGGGCTGCGCGCGAATTCCACGGCCAGCAACCGGGCCGCATCGACACCGGCGACTGGGCCAGCCAGTTCGACCTGTATCACGCCGATGGGCGCACCCCGATGGCGCCGATCGATATACCCCTGCTGCGCGCCCTGGGCGGCGAAAACGTGAAAAACCGGCCGATGGTGATCGCGCCGCGCGGCATGAAGCGGCGCACCGTGCTGGCCAGCGGCCGCGTGCTGCAAAGCGCGGCCGGCGAGCGTCTCGGCGCCGTGGTGGCCATGCACGACATCACGGAACTGAACGCATCGCAGGAAAAACTGCGCCACAGCGAACAGATGCTGCGCTCGATTACCGAGCACCTGCCGACCCTGATCGGCCAGGTGGACCGCCGTGGCCGCTTTGCCTTTCTCAATCTGCGCGCCCTGGAATTTTTCAAGCTGCCGGCCGAAAAGCTGCTCGGCCAGCCCATGCAGTCGGCCTACAGCGCCGGCGACTACAGCAAGATCGCCGCGCACGTGCAGAACGCCCTGGCTGGCCGCGCCGTCAACTTCGAGAGCGATATCGTGCTTGGCGGGCGCACCTATTATTATCACGCGGCCTATGTGCCGCAGATGGACGAGAAGGGCAATCCGGACGGCTTTTTTGCCATGGCCTTCGATATCAGCGCGCGCCGCCGCAGCGAAATCGCCCAGCGTGACAGCGAGGAGCGCCTGCGCACCATCACCGATAACGTGCCGGTGCTCATTTCCTACCTGGACTGCGATCTGCGCTACCGCTTCGCCAACGCCATGTACAAGGACTGGCTTGGCAAGACCAGCGCAGAGATGCTGGGGCGCACCGTGACGGAAGTGTTCGGCGACGAATATTTCGCGGCGCGCGCGCCCAGCATCGGCCAGGCGATGGGCGGCAATATGTCCAGCGTCGAAGTCAATGTGCTGCGCAAGGGCCGCGAGCGCATCCTCAACACGACCTACATGCCACACTACCGCGACGGCAAGGTGGCCGGGGTGTACGTGCTTGCCACCGACGCCACCGCCGCCCGCTCGCACGAGAAAAAGCTGCTGGCGCTGGCCAACGCCGACCCGCTGACCAATCTGCCCAACCGGCGCATGTACGAATTCCACCTGGTCAAGGCGCTGGCCTCGGCGCGGCGGCAACAGAGCCGCCTGGCCCTGATGTATCTAGACCTGGACAACTTCAAGCGCATCAATGACACCCACGGTCACGCGGTGGGCGATGCGGTGCTGGTCGAATTCGGCGAACGGGTAGGCGCCGCGGTGCGCGAATCGGATCTGCTGGCGCGCCTTGCGGGCGACGAATTCACTGTGGTGCTGGAAGGGGTGGAGAGCGTGGCCAACTGCGAGATGGTCGCGCGCAAGATTCTCGAGGCCCTGCGGCCGCCCTTCCTGTGCGGGCGTCAAGCCTTGCAGATCAGCGCCAGCATCGGCGTGGCGCTGGCCGACGGTGGCATCGACCAGATTGCGCTGTCGTCAAAGGCGGACGAGGCCCTGTACGCGGCCAAGCGCGCCGGCAAGGGGCGCTATGCGGTGCTGGAATTGCAGTCGGCCAGCGCGGCCGACGATTTCTACGGCGACCTGGGCTGA
PROTEIN sequence
Length: 896
MDKLPLSEYDRTVALAALGVLDTPSEARFDQFTHLARAAFGVPIALISLVDEKRQWFKSRSGLDATETPRSAAFCSHAIEGADTMIVPDALLDPRFADNPLVLGAPHIRFYAGHPVRARSGHALGTLCIIDTVPRELSADQQTMLRSLAGLVEAELNRDSLERVRQFAEAALHELNASLEARVRERTLALEEKNEALNREVRQRADVEASLRRSEARVRTMIEASFSAFVATDEHSCIIEWNKSAERVFGWTRAEVLGRSWMSVINSATAVFAPGHAAAGTADAAASRIVRLQASTRSGALITVEMVADSYLIDDQMVFGAFINDVSDQTVTARALEQKQELLDAVLETVDVAVVACDAAGNLSFFNRAAREFHGQQPGRIDTGDWASQFDLYHADGRTPMAPIDIPLLRALGGENVKNRPMVIAPRGMKRRTVLASGRVLQSAAGERLGAVVAMHDITELNASQEKLRHSEQMLRSITEHLPTLIGQVDRRGRFAFLNLRALEFFKLPAEKLLGQPMQSAYSAGDYSKIAAHVQNALAGRAVNFESDIVLGGRTYYYHAAYVPQMDEKGNPDGFFAMAFDISARRRSEIAQRDSEERLRTITDNVPVLISYLDCDLRYRFANAMYKDWLGKTSAEMLGRTVTEVFGDEYFAARAPSIGQAMGGNMSSVEVNVLRKGRERILNTTYMPHYRDGKVAGVYVLATDATAARSHEKKLLALANADPLTNLPNRRMYEFHLVKALASARRQQSRLALMYLDLDNFKRINDTHGHAVGDAVLVEFGERVGAAVRESDLLARLAGDEFTVVLEGVESVANCEMVARKILEALRPPFLCGRQALQISASIGVALADGGIDQIALSSKADEALYAAKRAGKGRYAVLELQSASAADDFYGDLG*